Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq1684 123 4e-23 >seq1684 Length=9696 Score = 123 bits (136), Expect = 4e-23 Identities = 203/293 (69%), Gaps = 0/293 (0%) Strand=Plus/Plus Query 35465 CTGGCCCTGGTATTTACCGCCGCGATCCTTGTACGAGATTTCGCAGTCCTCGTCACTCTC 35524 ||||||||||||||| ||||| ||||| ||||| | |||| || ||| || || Sbjct 2450 CTGGCCCTGGTATTTGCCGCCACGATCTTTGTAACTGGTTTCACAAATCTCATCTGATTC 2509 Query 35525 GAAAAACAGCATCTGCGCCACACCTTCGTTCGCGTACACACGCGCCGGCAGGTTGGTAGT 35584 || ||||| | || || |||||| || || | || || || || || Sbjct 2510 AAAGAACAGGACTTGGGCGCAGCCTTCGCCTGCATAAATCTTGGCGGGTAGAGGAGTCGT 2569 Query 35585 GTTGCTGAACTCCAGAGTCACATGACCTTCCCACTCAGGTTCCAGCGGCGTCACGTTGAC 35644 ||| |||||||| || || |||| ||||||||| || ||||| | ||| || ||||| || Sbjct 2570 GTTACTGAACTCAAGTGTGACATAACCTTCCCATTCCGGTTCAAACGGTGTGACGTTCAC 2629 Query 35645 GATGATACCACAGCGCGCGTAGGTGCTCTTACCCAAACACACCACGAGGACGTTGCGCGG 35704 ||||| || || || || || || ||| |||| || ||| | ||| ||| || Sbjct 2630 AATGATGCCGCAACGTGCATATGTTGACTTGCCCAGGCATACCGTTAACACGGAGCGTGG 2689 Query 35705 AATGCGGAAGTATTCGACCGTGCGTGCCAGAGCGAAGCTGTTCGGCGGAATCA 35757 ||| ||||| ||||| || ||||| ||||| || || ||| || || |||| Sbjct 2690 AATACGGAAATATTCTACTGTGCGCGCCAGTGCAAACGAGTTGGGGGGGATCA 2742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 825820962679320