Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_023498.1 Length=62466 Score E Sequences producing significant alignments: (Bits) Value seq5850 95.1 5e-15 >seq5850 Length=1395 Score = 95.1 bits (104), Expect = 5e-15 Identities = 108/143 (76%), Gaps = 4/143 (3%) Strand=Plus/Plus Query 56166 AGCAGCTCGGCACCCTCGGCGGCGGTAACCATTTCATCGAGCTGTGCC--TCGATCACCT 56223 ||||| ||||||| ||||||||||| ||||||||||||||| |||| | ||| | || Sbjct 754 AGCAGATCGGCACGCTCGGCGGCGGCAACCATTTCATCGAGGTGTGTCTGTCGGACGCC- 812 Query 56224 TGACCGGGTGTGGCTGTTCCTGCACTCCGGTTCGCGTGGCGTCGGCAACAAGATCGCCCA 56283 ||| ||| |||||| | ||||||||||| || || | ||||||| | | || | Sbjct 813 -GACGAGGTCTGGCTGATGCTGCACTCCGGGTCACGCAACATCGGCAAGGAACTGGCGGA 871 Query 56284 GCGGCATATCTCTGCGGCGCAGG 56306 |||||| ||| | | ||||| || Sbjct 872 GCGGCACATCGCGGTGGCGCGGG 894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 199743799116201