Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_023568.1 Length=246964 Score E Sequences producing significant alignments: (Bits) Value seq2003 98.7 2e-15 >seq2003 Length=7520 Score = 98.7 bits (108), Expect = 2e-15 Identities = 122/167 (73%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 78880 CCATTCTGGAAACACTTTCAAACTGCGGTTAAATCGTGTTCTCAAGGTGGTGTACGTGGG 78939 || |||| |||| || || ||||||| ||||| || || || || ||||| || || Sbjct 6902 CCGTTCTACAAACTGTTCCAGTCTGCGGTGAAATCCTGCTCGCAGGGCGGTGTGCGGGGT 6961 Query 78940 GGTGCTGCGACTCTAACTTACCCGATTTGGCACTTAGAAGTTGAAAAACTGTTAGTTCTG 78999 || || ||||| | |||||| | |||||| | ||||| ||| |||| | || ||| Sbjct 6962 GGGGCGGCGACGTTGTTCTACCCGTTGTGGCACCTTGAAGTCGAATCACTGCTGGTGCTG 7021 Query 79000 AAGAACAACAAAGGTGTTGAAGAAAACCGTATTCGTCATCTTGACTA 79046 || |||||| || || |||||||||||| | |||||||| || || Sbjct 7022 AAAAACAACCGCGGCGTAGAAGAAAACCGTGTGCGTCATCTCGATTA 7068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 790065112180320