Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_023568.1
Length=246964
Score E
Sequences producing significant alignments: (Bits) Value
seq2003 98.7 2e-15
>seq2003
Length=7520
Score = 98.7 bits (108), Expect = 2e-15
Identities = 122/167 (73%), Gaps = 0/167 (0%)
Strand=Plus/Plus
Query 78880 CCATTCTGGAAACACTTTCAAACTGCGGTTAAATCGTGTTCTCAAGGTGGTGTACGTGGG 78939
|| |||| |||| || || ||||||| ||||| || || || || ||||| || ||
Sbjct 6902 CCGTTCTACAAACTGTTCCAGTCTGCGGTGAAATCCTGCTCGCAGGGCGGTGTGCGGGGT 6961
Query 78940 GGTGCTGCGACTCTAACTTACCCGATTTGGCACTTAGAAGTTGAAAAACTGTTAGTTCTG 78999
|| || ||||| | |||||| | |||||| | ||||| ||| |||| | || |||
Sbjct 6962 GGGGCGGCGACGTTGTTCTACCCGTTGTGGCACCTTGAAGTCGAATCACTGCTGGTGCTG 7021
Query 79000 AAGAACAACAAAGGTGTTGAAGAAAACCGTATTCGTCATCTTGACTA 79046
|| |||||| || || |||||||||||| | |||||||| || ||
Sbjct 7022 AAAAACAACCGCGGCGTAGAAGAAAACCGTGTGCGTCATCTCGATTA 7068
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 790065112180320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |