Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq2305 87.8 5e-13 >seq2305 Length=6233 Score = 87.8 bits (96), Expect = 5e-13 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 21028 AATCGTGGTTATCAGAAATCCACTTATTACAAAGAAAACATCAACTCCAACAAATCCTCC 21087 ||||| ||| |||||| | ||||| || ||||| |||||||| || || | || || || Sbjct 5256 AATCGAGGTGATCAGATAACCACTGATCACAAAAAAAACATCTACGCCTAAGAAGCCGCC 5315 Query 21088 AGAGAATGACTTAAATCCGGCATGAAAAAGAATGACCGACAAAACTGCAATAGCGCGGAG 21147 ||||| | || || || || ||| ||||||| || | ||||| || | |||||||| Sbjct 5316 AGAGATTCGCTCAATACCTGCGTGATAAAGAATCACTGGTAAAACAGCCAGTGCGCGGAG 5375 Query 21148 TCCGTCTATCTCT 21160 ||| || || ||| Sbjct 5376 TCCATCGATTTCT 5388 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145622345459952