Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_023587.1
Length=189311
Score E
Sequences producing significant alignments: (Bits) Value
seq3574 86.0 8e-12
seq3681 84.2 3e-11
>seq3574
Length=2782
Score = 86.0 bits (94), Expect = 8e-12
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 19497 ATTCCTCTATAGCTCAGATGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19556
||||||| ||||||||| ||||||||| ||||||||||| || |||||||||||||
Sbjct 2474 ATTCCTCAATAGCTCAGTCGGTAGAGCGCCGGACTGTTAATCCGTAGGTCCCTGGTTCGA 2533
Query 19557 TCCCAGGTGGAGGAG 19571
||||||| ||||||
Sbjct 2534 GCCCAGGTTGAGGAG 2548
>seq3681
Length=2632
Score = 84.2 bits (92), Expect = 3e-11
Identities = 60/69 (87%), Gaps = 0/69 (0%)
Strand=Plus/Minus
Query 152586 ATGGCGGAATTGGTAGACGCGCTGGTTTTAGGTACCAGTGTCTTATGACGTGGAGGTTCA 152645
|||||| |||||||||||||||| |||| |||||| ||||| | |||||||||||||
Sbjct 232 ATGGCGAAATTGGTAGACGCGCTAGTTTCAGGTACTAGTGTTGAAAGACGTGGAGGTTCG 173
Query 152646 AGTCCTCTT 152654
|||||||||
Sbjct 172 AGTCCTCTT 164
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 605596919892280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |