Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_023587.1 Length=189311 Score E Sequences producing significant alignments: (Bits) Value seq3574 86.0 8e-12 seq3681 84.2 3e-11 >seq3574 Length=2782 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 19497 ATTCCTCTATAGCTCAGATGGTAGAGCGAGTGACTGTTAATCACTATGTCCCTGGTTCGA 19556 ||||||| ||||||||| ||||||||| ||||||||||| || ||||||||||||| Sbjct 2474 ATTCCTCAATAGCTCAGTCGGTAGAGCGCCGGACTGTTAATCCGTAGGTCCCTGGTTCGA 2533 Query 19557 TCCCAGGTGGAGGAG 19571 ||||||| |||||| Sbjct 2534 GCCCAGGTTGAGGAG 2548 >seq3681 Length=2632 Score = 84.2 bits (92), Expect = 3e-11 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 152586 ATGGCGGAATTGGTAGACGCGCTGGTTTTAGGTACCAGTGTCTTATGACGTGGAGGTTCA 152645 |||||| |||||||||||||||| |||| |||||| ||||| | ||||||||||||| Sbjct 232 ATGGCGAAATTGGTAGACGCGCTAGTTTCAGGTACTAGTGTTGAAAGACGTGGAGGTTCG 173 Query 152646 AGTCCTCTT 152654 ||||||||| Sbjct 172 AGTCCTCTT 164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 605596919892280