Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq1773 84.2 3e-11 >seq1773 Length=8977 Score = 84.2 bits (92), Expect = 3e-11 Identities = 85/108 (79%), Gaps = 2/108 (2%) Strand=Plus/Minus Query 92213 CCCTGCATGAACCAGAGCATCTCGTGAATGATGCTGCGCAAG-TGAACTTTCTTGGTGGT 92271 ||||||| ||||||||||| ||||||||||| | | || || ||||| |||||||| Sbjct 8315 CCCTGCAAGAACCAGAGCAATTCGTGAATGAT-CGACTTGAGATGGACTTTTTTGGTGGT 8257 Query 92272 GACTAGCGGAAACCCGTCCGCGAGGTTAAAGCGCATTTGGTGACCAAA 92319 || || || ||||| || || |||| ||||||||| |||| ||||| Sbjct 8256 GAGTAAGGGGAACCCTTCAGCCAGGTCAAAGCGCATCTGGTAGCCAAA 8209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698475741215320