Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_023724.1
Length=62991
Score E
Sequences producing significant alignments: (Bits) Value
seq5850 102 3e-17
>seq5850
Length=1395
Score = 102 bits (112), Expect = 3e-17
Identities = 111/146 (76%), Gaps = 5/146 (3%)
Strand=Plus/Plus
Query 51994 CCGAACTGCCGTTCGTGCATCCGCACGTTGCCC-TCATGCCCGACGCGCACGTCGGCAAA 52052
|||| ||||||| ||||| | | ||| | |||||||||||| ||||| |||||
Sbjct 388 CCGACCTGCCGTGGGTGCA----CGGGGTGCGCGTCATGCCCGACGTCCACGTGGGCAAG 443
Query 52053 GGTTCGTCTGTTGGTACCGTCATCCCCACCCGCGGCGCAGTCATCCCCGCCGCGGTCGGT 52112
||| || | || ||| |||||||| | | || | || ||| |||||| ||||||||
Sbjct 444 GGTGCGACGGTCGGTTCCGTCATCGCGATGCGGGAGGCGGTCGCCCCCGCGGCGGTCGGC 503
Query 52113 GTCGACATCGGCTGCGGCATGATCGC 52138
||||||||||||||||| |||| |||
Sbjct 504 GTCGACATCGGCTGCGGAATGACCGC 529
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 201423609046776
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |