Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_023724.1 Length=62991 Score E Sequences producing significant alignments: (Bits) Value seq5850 102 3e-17 >seq5850 Length=1395 Score = 102 bits (112), Expect = 3e-17 Identities = 111/146 (76%), Gaps = 5/146 (3%) Strand=Plus/Plus Query 51994 CCGAACTGCCGTTCGTGCATCCGCACGTTGCCC-TCATGCCCGACGCGCACGTCGGCAAA 52052 |||| ||||||| ||||| | | ||| | |||||||||||| ||||| ||||| Sbjct 388 CCGACCTGCCGTGGGTGCA----CGGGGTGCGCGTCATGCCCGACGTCCACGTGGGCAAG 443 Query 52053 GGTTCGTCTGTTGGTACCGTCATCCCCACCCGCGGCGCAGTCATCCCCGCCGCGGTCGGT 52112 ||| || | || ||| |||||||| | | || | || ||| |||||| |||||||| Sbjct 444 GGTGCGACGGTCGGTTCCGTCATCGCGATGCGGGAGGCGGTCGCCCCCGCGGCGGTCGGC 503 Query 52113 GTCGACATCGGCTGCGGCATGATCGC 52138 ||||||||||||||||| |||| ||| Sbjct 504 GTCGACATCGGCTGCGGAATGACCGC 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201423609046776