Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_023744.1 Length=60588 Score E Sequences producing significant alignments: (Bits) Value seq5850 91.5 6e-14 >seq5850 Length=1395 Score = 91.5 bits (100), Expect = 6e-14 Identities = 131/179 (73%), Gaps = 7/179 (4%) Strand=Plus/Plus Query 49384 GCCGGCCTGCCGTTCGTCCACCCGCATGTGGCGC-TGATGCCCGACGCGCACGCCGGCAA 49442 |||| |||||||| || ||| | ||| ||| | |||||||||| |||| ||||| Sbjct 387 GCCGACCTGCCGTGGGTGCACGGG---GTG-CGCGTCATGCCCGACGTCCACGTGGGCAA 442 Query 49443 GGGTTCATCGGTCGGCACCGTCATCCCGACTATCGACGCCGTGATCCCGGCCGCGGTGGG 49502 |||| | ||||||| |||||||| ||| || || || ||| || ||||| || Sbjct 443 GGGTGCGACGGTCGGTTCCGTCATCGCGATGCGGGAGGCGGTCGCCCCCGCGGCGGTCGG 502 Query 49503 CGTGGACATCGGCTGCGGGATGATCGCCGCCCGCACC-ATCTACACCGAGGACGACCTG 49560 ||| |||||||||||||| |||| ||| | ||| ||| || | |||| | ||||||| Sbjct 503 CGTCGACATCGGCTGCGGAATGACCGCGGTCCGGACCGATGT-GACCGCGAGCGACCTG 560 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 193738640745300