Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_024121.1 Length=167266 Score E Sequences producing significant alignments: (Bits) Value seq2003 190 2e-43 >seq2003 Length=7520 Score = 190 bits (210), Expect = 2e-43 Identities = 291/412 (71%), Gaps = 2/412 (0%) Strand=Plus/Minus Query 139708 ACATCAGATCGTTGATTTGCACACCGTAATCCAAGTGACGAATGCGGTTCTCTTCAACGC 139767 ||||||| |||||| ||||| || ||||| | ||||| | ||||| ||||| |||| Sbjct 7094 ACATCAGGCGGTTGATCTGCACGCCATAATCGAGATGACGCACACGGTTTTCTTCTACGC 7035 Query 139768 CTTTGTTGTTTTTCAGAACAAGCAAGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACA 139827 | |||||||||||| || |||| ||| ||||| | |||||| | || ||| ||| Sbjct 7034 CGCGGTTGTTTTTCAGCACCAGCAGTGATTCGACTTCAAGGTGCCACAACGGGTAGAACA 6975 Query 139828 ACGTCGCTGCACCACCACGAACACCACCTTGAGAACAGGATTTAACCGCAGTCTGGAAGT 139887 ||||||| || ||||| || ||||| || || || |||||||| ||||||| |||||| Sbjct 6974 ACGTCGCCGCCCCACCCCGCACACCGCCCTGCGAGCAGGATTTCACCGCAGACTGGAACA 6915 Query 139888 GTTTCCAGAAAGGAATTACGCCAGTGTGTTTGACTTCACCGAAACCAATTTTTGAGCCTT 139947 |||| |||| || | || || |||| |||| ||| || || | ||| Sbjct 6914 GTTTGTAGAACGGCAGGCAACCGGTATGTTGCGCTTCGCCGCCACGTATCTCGCTGCCCA 6855 Query 139948 CAGCTCGGATTCGACCTGCGTTGATGCCGATTCCAGCTCGTTTAGAAATGTACTTGACAA 140007 || ||||| || || ||||||| ||| || || || |||| || | ||||| || | Sbjct 6854 GCGCGCGGATGCGGCCCGCGTTGACGCCTATGCCGGCGCGTTGCGAGACATACTTCACGA 6795 Query 140008 TCGATGCTGCTGAGT-CGTTGATACTGTTAAGCGAATCATCAGACTCGATAACAACACAC 140066 ||| |||| || | | ||||| |||| || |||||| ||||||| | || || Sbjct 6794 TCG-CGCTGGTGGTTGCATTGATGCTGTCCAGGCTGTCATCACACTCGATCAGTACGCAG 6736 Query 140067 GAACTGAATTGACGAATCGGTGTACGGGCTCCTGCCATAATAGGAGTTGGCA 140118 || ||||| || || | || ||||| | || ||||| ||||| || |||| Sbjct 6735 GAGCTGAACTGGCGCGTAGGAGTACGCACACCGGCCATGATAGGCGTAGGCA 6684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535061105641680