Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq1773 105 7e-18 >seq1773 Length=8977 Score = 105 bits (116), Expect = 7e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142252 CAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAGCTGCATCTG 142311 |||||||| || | |||||| |||| || || | ||| |||| || || | ||||| Sbjct 8218 CAGATGCGCTTTGACCTGGCTGAAGGGTTCCCCTTACTCACCACCAAAAAAGTCCATCTC 8277 Query 142312 AAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATCAAGTATCTT 142371 ||||||||||| |||| | || |||||| | | ||| ||| || || ||||| Sbjct 8278 AAGTCGATCATTCACGAATTGCTCTGGTTCTTGCAGGGCAGTACCAATATTGCATATCTC 8337 Query 142372 CACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAACCTCGGACCT 142431 | || || ||||| || |||||||| ||||| |||||| | |||||||| || || Sbjct 8338 AAGGAAAACGGCGTCAGCATTTGGGATGAGTGGGCAGATGCCGAAGGCAACCTTGGTCCA 8397 Query 142432 GTCTACGGCAAGCAGTGG 142449 || || ||| | |||||| Sbjct 8398 GTGTATGGCTACCAGTGG 8415 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500441123324080