Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_026927.1
Length=228143
Score E
Sequences producing significant alignments: (Bits) Value
seq3915 84.2 3e-11
>seq3915
Length=2367
Score = 84.2 bits (92), Expect = 3e-11
Identities = 123/171 (72%), Gaps = 6/171 (4%)
Strand=Plus/Minus
Query 150510 CTAGACTGGGAAGCTCTACGAGCCGATTGTCTGAAGTATGGAGTCCGTAACTCCACCCTC 150569
|| ||||||||| || || ||||| || ||| |||| | ||||||||||||||
Sbjct 2016 CTCGACTGGGAAAGCCTGCGCGCCGAGATTCAGAAAGATGGCTTGCGTAACTCCACCCTG 1957
Query 150570 TCGGCACAGATGCCCTCTGAGTCCTCCT--CAG-TCGTCTGTAACGCCACCAACGGTATC 150626
| || | |||||| || ||| | ||| ||| ||| | ||||||||||||||||||
Sbjct 1956 ACCGCGCTGATGCCTTCAGAGACGTCCAGCCAGATCGCC---AACGCCACCAACGGTATC 1900
Query 150627 GAACCACCCAGAGGGTTCCTATCGGTGAAGAAGTCCAAGAAGGGAACCCTG 150677
|| ||||| | || | | ||||| ||| ||||||| | || | ||||
Sbjct 1899 GAGCCACCGCGTGGCCTGGTGTCGGTCAAGCAGTCCAAAGACGGCATCCTG 1849
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 729844900794040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |