Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_027331.1 Length=170341 Score E Sequences producing significant alignments: (Bits) Value seq2003 122 9e-23 >seq2003 Length=7520 Score = 122 bits (134), Expect = 9e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 143117 CATCAGGTCGTTGATTTGAAGACCATAGTCCAGGTGACGAATTCGGTTTTCATCTACGCC 143176 ||||||| |||||| || | ||||| || || ||||| | |||||||| |||||||| Sbjct 7093 CATCAGGCGGTTGATCTGCACGCCATAATCGAGATGACGCACACGGTTTTCTTCTACGCC 7034 Query 143177 TTTGTTGTTCTTAAGTACGAGGAGATTCTCGACTTCAAGATGCCAAATTGGATAGTACAA 143236 |||||| || || || || || ||||||||||| ||||| | || ||| |||| Sbjct 7033 GCGGTTGTTTTTCAGCACCAGCAGTGATTCGACTTCAAGGTGCCACAACGGGTAGAACAA 6974 Query 143237 TGTTGCGGCACCACCACGAACTCCGCCTTGGGAACAGGATTTAACTGCAGTTTGGAAGTG 143296 || || || ||||| || || ||||| || || |||||||| || |||| ||||| | Sbjct 6973 CGTCGCCGCCCCACCCCGCACACCGCCCTGCGAGCAGGATTTCACCGCAGACTGGAACAG 6914 Query 143297 TTTCCAGAAAGG 143308 ||| |||| || Sbjct 6913 TTTGTAGAACGG 6902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 544899963832680