Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_027404.1
Length=167785
Score E
Sequences producing significant alignments: (Bits) Value
seq2003 82.4 8e-11
>seq2003
Length=7520
Score = 82.4 bits (90), Expect = 8e-11
Identities = 119/168 (71%), Gaps = 0/168 (0%)
Strand=Plus/Minus
Query 138884 CTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTTTTCAA 138943
||| || |||||||| | |||||| | ||||||||||||||||| ||| |||||||
Sbjct 7078 CTGCACGCCATAATCGAGATGACGCACACGGTTTTCTTCTACGCCGCGGTTGTTTTTCAG 7019
Query 138944 AACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCC 139003
|| || || ||| ||||| | ||||| | || || | || || || || ||
Sbjct 7018 CACCAGCAGTGATTCGACTTCAAGGTGCCACAACGGGTAGAACAACGTCGCCGCCCCACC 6959
Query 139004 ACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTT 139051
|| | || ||||| ||||| ||||| || |||| ||| || ||||
Sbjct 6958 CCGCACACCGCCCTGCGAGCAGGATTTCACCGCAGACTGGAACAGTTT 6911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 536721712926600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |