Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_028683.1 Length=177643 Score E Sequences producing significant alignments: (Bits) Value seq2003 113 5e-20 >seq2003 Length=7520 Score = 113 bits (124), Expect = 5e-20 Identities = 136/184 (74%), Gaps = 1/184 (1%) Strand=Plus/Minus Query 147773 ACATCAGGTCATTAATCTGGACGCCATAATCTAAGTGACGAATACGGTTCTCGTCTACAC 147832 |||||||| || ||||| ||||||||||| | ||||| | |||||| || ||||| | Sbjct 7094 ACATCAGGCGGTTGATCTGCACGCCATAATCGAGATGACGCACACGGTTTTCTTCTACGC 7035 Query 147833 CTTTATTGTTTTTCAGAACGAGAAGGTTTTCGACTTCTAAATGCCAAATTGGATAGTACA 147892 | ||||||||||| || || || ||||||||| | ||||| | || ||| ||| Sbjct 7034 CGCGGTTGTTTTTCAGCACCAGCAGTGATTCGACTTCAAGGTGCCACAACGGGTAGAACA 6975 Query 147893 ATGTTGCTGCACCACCACGTACACCACCTTGGGAACATGATTTAACAGAAG-CTTGAATA 147951 | || || || ||||| || ||||| || || || || ||||| || | || || ||| | Sbjct 6974 ACGTCGCCGCCCCACCCCGCACACCGCCCTGCGAGCAGGATTTCACCGCAGACTGGAACA 6915 Query 147952 GTTT 147955 |||| Sbjct 6914 GTTT 6911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 568263652454040