Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_028683.1
Length=177643
Score E
Sequences producing significant alignments: (Bits) Value
seq2003 113 5e-20
>seq2003
Length=7520
Score = 113 bits (124), Expect = 5e-20
Identities = 136/184 (74%), Gaps = 1/184 (1%)
Strand=Plus/Minus
Query 147773 ACATCAGGTCATTAATCTGGACGCCATAATCTAAGTGACGAATACGGTTCTCGTCTACAC 147832
|||||||| || ||||| ||||||||||| | ||||| | |||||| || ||||| |
Sbjct 7094 ACATCAGGCGGTTGATCTGCACGCCATAATCGAGATGACGCACACGGTTTTCTTCTACGC 7035
Query 147833 CTTTATTGTTTTTCAGAACGAGAAGGTTTTCGACTTCTAAATGCCAAATTGGATAGTACA 147892
| ||||||||||| || || || ||||||||| | ||||| | || ||| |||
Sbjct 7034 CGCGGTTGTTTTTCAGCACCAGCAGTGATTCGACTTCAAGGTGCCACAACGGGTAGAACA 6975
Query 147893 ATGTTGCTGCACCACCACGTACACCACCTTGGGAACATGATTTAACAGAAG-CTTGAATA 147951
| || || || ||||| || ||||| || || || || ||||| || | || || ||| |
Sbjct 6974 ACGTCGCCGCCCCACCCCGCACACCGCCCTGCGAGCAGGATTTCACCGCAGACTGGAACA 6915
Query 147952 GTTT 147955
||||
Sbjct 6914 GTTT 6911
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 568263652454040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |