Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq2003 122 9e-23 >seq2003 Length=7520 Score = 122 bits (134), Expect = 9e-23 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 128633 CATCAGGTTATTAATCTGAACACCATAATCTAAATGACGAATACGGTTTTCATCTACACC 128692 ||||||| || ||||| || |||||||| | |||||| | ||||||||| ||||| || Sbjct 7093 CATCAGGCGGTTGATCTGCACGCCATAATCGAGATGACGCACACGGTTTTCTTCTACGCC 7034 Query 128693 TTTGTTGTTCTTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAG 128752 |||||| || || || || || ||| ||||| | |||||| | || ||| ||| Sbjct 7033 GCGGTTGTTTTTCAGCACCAGCAGTGATTCGACTTCAAGGTGCCACAACGGGTAGAACAA 6974 Query 128753 TGTCGCCGCGCCACCACGGACTCCGCCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTG 128812 |||||||| ||||| || || ||||| || ||||||||||| || || | ||||| | Sbjct 6973 CGTCGCCGCCCCACCCCGCACACCGCCCTGCGAGCAGGATTTCACCGCAGACTGGAACAG 6914 Query 128813 CTTCCAGAAAGGAATAACTCCAGTATGTTTGACTTCACCG 128852 || |||| || | || ||||||| |||| ||| Sbjct 6913 TTTGTAGAACGGCAGGCAACCGGTATGTTGCGCTTCGCCG 6874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 532011859509640