Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq2003 87.8 2e-12 >seq2003 Length=7520 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 137427 GCATCATACATACCAGGGATTTCATGTGGACTAAACAATGTAATATAATCATCATTAATT 137486 ||||| |||| |||||||| ||||| || ||||| || || | | | || || Sbjct 7164 GCATCGTACAAGCCAGGGATATCATGCGGTGAAAACAGAGTGATGTTCTGGCCCTTGATC 7105 Query 137487 AGTCGTTCAATCATAAGGTCATTAATTTGAACACCATAATCTAAATGACGAATACGGTTT 137546 || || | ||| ||| || || || || |||||||| | |||||| | ||||||| Sbjct 7104 AGGCGCTGGTACATCAGGCGGTTGATCTGCACGCCATAATCGAGATGACGCACACGGTTT 7045 Query 137547 TCTTCAATACCTTTATTATTTTTAAGAACTAACAATTTTTCTAATTCAAGGTGCCACATT 137606 ||||| | || || ||||| || || | || | ||| | |||||||||||||| Sbjct 7044 TCTTCTACGCCGCGGTTGTTTTTCAGCACCAGCAGTGATTCGACTTCAAGGTGCCACAAC 6985 Query 137607 GGGTAATATAAAGTAGCAGAACCACCTCGAATCCCACCTTGGGAACATGATTTTAC 137662 ||||| | || || || | ||||| || | || || || || || ||||| || Sbjct 6984 GGGTAGAACAACGTCGCCGCCCCACCCCGCACACCGCCCTGCGAGCAGGATTTCAC 6929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518176665097320