Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_028773.1
Length=182145
Score E
Sequences producing significant alignments: (Bits) Value
seq3915 95.1 1e-14
>seq3915
Length=2367
Score = 95.1 bits (104), Expect = 1e-14
Identities = 136/190 (72%), Gaps = 4/190 (2%)
Strand=Plus/Minus
Query 19468 GACTGGGAAGCGCTTCGTGCCGACATCATGAAATATGGTCTTCGTAACTCTACGTTGTCA 19527
||||||||| || || ||||| || |||| |||| | |||||||| || || |
Sbjct 2013 GACTGGGAAAGCCTGCGCGCCGAGATTCAGAAAGATGGCTTGCGTAACTCCACCCTGACC 1954
Query 19528 GCGCTGATGCCTTGTGAATCAAGTTCA--CAGATCACCAACTCCACGAACGGTATCGAGC 19585
||||||||||||| || | || || |||||| ||||| |||| |||||||||||||
Sbjct 1953 GCGCTGATGCCTTCAGAGAC--GTCCAGCCAGATCGCCAACGCCACCAACGGTATCGAGC 1896
Query 19586 CGCCTCGTCAGTTGCTGAGTGTAAAACAGTCTAAAGACGGTGTACTGAATCAGCTTGTTC 19645
| || ||| || || || || ||||| |||||||| | ||| ||| | || |
Sbjct 1895 CACCGCGTGGCCTGGTGTCGGTCAAGCAGTCCAAAGACGGCATCCTGCGCCAGGTAGTGC 1836
Query 19646 CTGAAGTTGA 19655
|||| ||||
Sbjct 1835 CTGAGATTGA 1826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 582668380771400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |