Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_028876.1 Length=109800 Score E Sequences producing significant alignments: (Bits) Value seq4659 87.8 1e-12 >seq4659 Length=1816 Score = 87.8 bits (96), Expect = 1e-12 Identities = 126/177 (71%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 96676 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 96735 ||||||||||| ||| || ||||| |||| |||||||| ||||| ||||| || |||| Sbjct 406 CGGCACGTTGGCTTTAATCAGGCCAGTGATCACATCCACCGAGGGACGCTGGGTGGCCAA 465 Query 96736 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 96795 || | |||||| |||| || || || || || || | ||| |||| |||| | Sbjct 466 TACCAAATGAATGCCGGACGCACGGGCTTTTTGCGCCAGGCGCGCAATCAGCTCCTCCA- 524 Query 96796 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGACCACTACCACGAT 96852 |||||||| | ||||||| || || || || || |||| || ||||| || Sbjct 525 --CTTTCTTGCCAACCACCATCATCAGATCCGCCAGCTCATCGATGACCACCACAAT 579 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351195462456843