Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_028931.1 Length=55108 Score E Sequences producing significant alignments: (Bits) Value seq4021 104 8e-18 >seq4021 Length=2253 Score = 104 bits (114), Expect = 8e-18 Identities = 129/177 (73%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 4342 CTGTGGGACGCTGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTTCATC 4401 |||||||| | ||||| ||||||| |||| |||||||| || | | | ||| Sbjct 1628 CTGTGGGATGTCATCATGTCTTCCACCTACGACTTTGCCGAGCCAGGGTTTATTCTGATC 1569 Query 4402 GACACCATCAACCGCATGAACAATCTCTGGTACTGCGAGGAGATTGCGGCCACCAACCCG 4461 ||| | ||||| |||||||| ||||| |||||| | || ||||||||||| Sbjct 1568 GACCGCGTCAACGAAATGAACAACAACTGGTTCTGCGAAAACATCCGCGCCACCAACCCA 1509 Query 4462 TGCGGCGAGCAGCCGCTGCCTCCGTTCGGCGCCTGCCTGCTTGGCTCCTTCAACCTG 4518 ||||| ||||| || |||| || | |||||||||||||| || ||| |||||||| Sbjct 1508 TGCGGTGAGCAACCCTTGCCACCTTATGGCGCCTGCCTGCTCGGTTCCGTCAACCTG 1452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 176204573837220