Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_028931.1
Length=55108
Score E
Sequences producing significant alignments: (Bits) Value
seq4021 104 8e-18
>seq4021
Length=2253
Score = 104 bits (114), Expect = 8e-18
Identities = 129/177 (73%), Gaps = 0/177 (0%)
Strand=Plus/Minus
Query 4342 CTGTGGGACGCTGTCATGCGCTCCACCTGGGACTGGGCCGAGCCGGGCGTCCTGTTCATC 4401
|||||||| | ||||| ||||||| |||| |||||||| || | | | |||
Sbjct 1628 CTGTGGGATGTCATCATGTCTTCCACCTACGACTTTGCCGAGCCAGGGTTTATTCTGATC 1569
Query 4402 GACACCATCAACCGCATGAACAATCTCTGGTACTGCGAGGAGATTGCGGCCACCAACCCG 4461
||| | ||||| |||||||| ||||| |||||| | || |||||||||||
Sbjct 1568 GACCGCGTCAACGAAATGAACAACAACTGGTTCTGCGAAAACATCCGCGCCACCAACCCA 1509
Query 4462 TGCGGCGAGCAGCCGCTGCCTCCGTTCGGCGCCTGCCTGCTTGGCTCCTTCAACCTG 4518
||||| ||||| || |||| || | |||||||||||||| || ||| ||||||||
Sbjct 1508 TGCGGTGAGCAACCCTTGCCACCTTATGGCGCCTGCCTGCTCGGTTCCGTCAACCTG 1452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 176204573837220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |