Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_028980.1 Length=62181 Score E Sequences producing significant alignments: (Bits) Value seq4021 105 3e-18 >seq4021 Length=2253 Score = 105 bits (116), Expect = 3e-18 Identities = 136/185 (74%), Gaps = 2/185 (1%) Strand=Plus/Minus Query 33082 CTGTGGGACGCGATCATGCGCGGGACCTGGGACTGGGCGGAGCCTGGGGTGCTGTTCATC 33141 |||||||| | |||||| |||| |||| || ||||| ||| | | | ||| Sbjct 1628 CTGTGGGATGTCATCATGTCTTCCACCTACGACTTTGCCGAGCCAGGGTTTATTCTGATC 1569 Query 33142 GAC-GCGATCAACCGCATGAACAACCTCTGGTACTGCGAGACCATCGCCGCCACCAACCC 33200 ||| ||| ||||| ||||||||| ||||| |||||| | |||| |||||||||||| Sbjct 1568 GACCGCG-TCAACGAAATGAACAACAACTGGTTCTGCGAAAACATCCGCGCCACCAACCC 1510 Query 33201 CTGCGGTGAGCAACCGCTCCCGCCCTACGGTGCCTGCTTGTTGGGCTCCTTCAACTTGGT 33260 |||||||||||||| | || || || || |||||| || | || ||| ||||| || Sbjct 1509 ATGCGGTGAGCAACCCTTGCCACCTTATGGCGCCTGCCTGCTCGGTTCCGTCAACCTGAC 1450 Query 33261 CAAGT 33265 ||||| Sbjct 1449 CAAGT 1445 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 198831902296746