Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_029121.1 Length=151417 Score E Sequences producing significant alignments: (Bits) Value seq478 89.7 5e-13 >seq478 Length=29740 Score = 89.7 bits (98), Expect = 5e-13 Identities = 117/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 125409 TGCAAGATGTATCAACGATCAGCAGACGTATTTTTAGGAGTACCATTCAATATCGCAAGC 125468 ||| ||||||| || || ||||| ||| | | || || |||||||||||||| ||| Sbjct 15464 TGCCAGATGTACCAGCGCTCAGCTGACATGGGGCTCGGCGTCCCATTCAATATCGCCAGC 15523 Query 125469 TACGCACTATTGACTCACCTTATCGCAAAGATGACAGGGTTAAAACCCGGAAAATTCATT 125528 ||||| || | || | | | | ||| || || |||| || |||||||| | || ||| Sbjct 15524 TACGCGCTGCTAACGCGCTTAGTGGCACAGGTGGCAGGTTTGAAACCCGGCGAGTTTATT 15583 Query 125529 CATACCTTTGGTGACGCTCATATCTATAACAACCACATTGAA 125570 ||| | |||||||||| ||| | ||| |||||| | ||| Sbjct 15584 CATGTCATTGGTGACGCGCATGTGTATCTGAACCACGTGGAA 15625 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 484350190692360