Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_031010.1 Length=246390 Score E Sequences producing significant alignments: (Bits) Value seq1773 111 2e-19 >seq1773 Length=8977 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 202534 GGTCATGAAAAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATG 202593 || |||| || | ||||||||||||||| ||||| || | || || ||||||| Sbjct 8164 GGGCATGTTAAAACAGACCGTACCGGCACGGGCACTATTTCTGTATTTGGCTACCAGATG 8223 Query 202594 CGGTTTGACCTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCT 202653 || ||||||||| | ||||| ||||| | | ||||| ||||| || || ||| || Sbjct 8224 CGCTTTGACCTGGCTGAAGGGTTCCCCTTACTCACCACCAAAAAAGTCCATCTCAAGTCG 8283 Query 202654 ATCATTCACGAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGAT 202713 ||||||||||| |||| |||||| || | || ||||| || || || || || Sbjct 8284 ATCATTCACGAATTGCTCTGGTTCTTGCAGGGCAGTACCAATATTGCATATCTCAAGGAA 8343 Query 202714 AACGGGGTCACTATCTGGGACGAATGGGC 202742 ||||| |||| || ||||| || ||||| Sbjct 8344 AACGGCGTCAGCATTTGGGATGAGTGGGC 8372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 788228525318000