Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_031010.1
Length=246390
Score E
Sequences producing significant alignments: (Bits) Value
seq1773 111 2e-19
>seq1773
Length=8977
Score = 111 bits (122), Expect = 2e-19
Identities = 150/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 202534 GGTCATGAAAAGAAAGACCGTACCGGCACCGGCACGCGCTCCTTGTTCGGGGCCCAGATG 202593
|| |||| || | ||||||||||||||| ||||| || | || || |||||||
Sbjct 8164 GGGCATGTTAAAACAGACCGTACCGGCACGGGCACTATTTCTGTATTTGGCTACCAGATG 8223
Query 202594 CGGTTTGACCTGACCGAAGGCTTCCCACTGGTGACCACGAAAAAGGTTCACCTCCGTTCT 202653
|| ||||||||| | ||||| ||||| | | ||||| ||||| || || ||| ||
Sbjct 8224 CGCTTTGACCTGGCTGAAGGGTTCCCCTTACTCACCACCAAAAAAGTCCATCTCAAGTCG 8283
Query 202654 ATCATTCACGAGCTGCTGTGGTTCCTGAAAGGGGACACCAACATCAGTTACCTGAACGAT 202713
||||||||||| |||| |||||| || | || ||||| || || || || ||
Sbjct 8284 ATCATTCACGAATTGCTCTGGTTCTTGCAGGGCAGTACCAATATTGCATATCTCAAGGAA 8343
Query 202714 AACGGGGTCACTATCTGGGACGAATGGGC 202742
||||| |||| || ||||| || |||||
Sbjct 8344 AACGGCGTCAGCATTTGGGATGAGTGGGC 8372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 788228525318000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |