Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_031103.1 Length=165772 Score E Sequences producing significant alignments: (Bits) Value seq2003 89.7 5e-13 >seq2003 Length=7520 Score = 89.7 bits (98), Expect = 5e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 138416 TGAACGCCATAATCCATATGACGAATACGGTTTTCTTCTACGCCTTTGTTATTTTTCAAA 138475 || ||||||||||| | |||||| | |||||||||||||||||| ||| ||||||| Sbjct 7077 TGCACGCCATAATCGAGATGACGCACACGGTTTTCTTCTACGCCGCGGTTGTTTTTCAGC 7018 Query 138476 ACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCGCCGCCA 138535 || || || ||| ||||| | ||||| | || || | || || || || || Sbjct 7017 ACCAGCAGTGATTCGACTTCAAGGTGCCACAACGGGTAGAACAACGTCGCCGCCCCACCC 6958 Query 138536 CGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTT 138582 || | || ||||| ||||| ||||| || |||| ||| || |||| Sbjct 6957 CGCACACCGCCCTGCGAGCAGGATTTCACCGCAGACTGGAACAGTTT 6911 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 530280860393760