Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020 15-10-27] 9,283 sequences; 70,257,463 total letters Query= NC_031127.1 Length=240761 Score E Sequences producing significant alignments: (Bits) Value seq1773 167 4e-36 >seq1773 Length=8977 Score = 167 bits (184), Expect = 4e-36 Identities = 184/245 (75%), Gaps = 0/245 (0%) Strand=Plus/Plus Query 196065 AAAGCTGACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGAC 196124 ||| | |||||||||||||||||||| || ||| | || || || |||||||| |||||| Sbjct 8173 AAAACAGACCGTACCGGCACGGGCACTATTTCTGTATTTGGCTACCAGATGCGCTTTGAC 8232 Query 196125 CTGCGCAAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCAC 196184 ||| |||||||||| | ||||||||||||| | || || || ||||| ||| Sbjct 8233 CTGGCTGAAGGGTTCCCCTTACTCACCACCAAAAAAGTCCATCTCAAGTCGATCATTCAC 8292 Query 196185 GAACTGTTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTC 196244 ||| || | |||||| || | ||| ||||| || ||||| || || ||| |||| Sbjct 8293 GAATTGCTCTGGTTCTTGCAGGGCAGTACCAATATTGCATATCTCAAGGAAAACGGCGTC 8352 Query 196245 AGTATCTGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAG 196304 || || ||||||||||||||||||| || ||| | ||||| || || || || | ||| Sbjct 8353 AGCATTTGGGATGAGTGGGCAGATGCCGAAGGCAACCTTGGTCCAGTGTATGGCTACCAG 8412 Query 196305 TGGCG 196309 ||||| Sbjct 8413 TGGCG 8417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 770217815478280