Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414265.1_2020
15-10-27] 9,283 sequences; 70,257,463 total letters
Query= NC_031127.1
Length=240761
Score E
Sequences producing significant alignments: (Bits) Value
seq1773 167 4e-36
>seq1773
Length=8977
Score = 167 bits (184), Expect = 4e-36
Identities = 184/245 (75%), Gaps = 0/245 (0%)
Strand=Plus/Plus
Query 196065 AAAGCTGACCGTACCGGCACGGGCACCATCTCTATTTTCGGGTATCAGATGCGTTTTGAC 196124
||| | |||||||||||||||||||| || ||| | || || || |||||||| ||||||
Sbjct 8173 AAAACAGACCGTACCGGCACGGGCACTATTTCTGTATTTGGCTACCAGATGCGCTTTGAC 8232
Query 196125 CTGCGCAAAGGGTTCCCGCTGGTCACCACCAAAAAGTTGCACCTGCGATCTATCATCCAC 196184
||| |||||||||| | ||||||||||||| | || || || ||||| |||
Sbjct 8233 CTGGCTGAAGGGTTCCCCTTACTCACCACCAAAAAAGTCCATCTCAAGTCGATCATTCAC 8292
Query 196185 GAACTGTTGTGGTTCCTGAACGGCGACACCAACATCCAGTATCTGAAAGACAACAACGTC 196244
||| || | |||||| || | ||| ||||| || ||||| || || ||| ||||
Sbjct 8293 GAATTGCTCTGGTTCTTGCAGGGCAGTACCAATATTGCATATCTCAAGGAAAACGGCGTC 8352
Query 196245 AGTATCTGGGATGAGTGGGCAGATGAAGATGGCGATCTTGGCCCCGTCTACGGTAAGCAG 196304
|| || ||||||||||||||||||| || ||| | ||||| || || || || | |||
Sbjct 8353 AGCATTTGGGATGAGTGGGCAGATGCCGAAGGCAACCTTGGTCCAGTGTATGGCTACCAG 8412
Query 196305 TGGCG 196309
|||||
Sbjct 8413 TGGCG 8417
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 770217815478280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |