Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= AC_000014.1 Length=43804 Score E Sequences producing significant alignments: (Bits) Value seq276 80.6 7e-11 >seq276 Length=79158 Score = 80.6 bits (88), Expect = 7e-11 Identities = 129/180 (72%), Gaps = 8/180 (4%) Strand=Plus/Minus Query 1011 GCTGTTACGGTCGGATTGCTCCTCGCTCGGG-CTTGGCCGCCAAATT-TTTCATTGACGT 1068 |||| |||| || | || ||||||||||| |||| ||| || |||||| ||| Sbjct 10082 GCTGCTACGCCCGCGTGGCGCCTCGCTCGGGTCTTG--CGCTGAAGAATTTCATCGACAC 10025 Query 1069 CGGAGCGGGTGTTATCGATCCCGATTACCGCGGGAACGTTAGCGTGGTTTTGTTCAATTT 1128 || || ||||| |||||| ||||||||||||| ||||| ||||| | ||||||| Sbjct 10024 TGGCGCTGGTGTCATCGATGCCGATTACCGCGGTAACGTGGGCGTGCTCCTGTTCAACCA 9965 Query 1129 CTC--CGAGAGCTCGTTCAACATCAGGCGAGGCGATAGGGTAGCACAGCTTATTCTGGAG 1186 ||| || || || | ||| |||||| ||| | ||||| ||||| ||||| ||| Sbjct 9964 CTCGACGGAAG--ACTTTGCCGTCAAGCGAGGGGATCGAGTAGCGCAGCTCATTCTCGAG 9907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140031099676712