Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq413 95.1 1e-14 >seq413 Length=60602 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 18972 ATGGTACTACCTCCATGTCACACGTTATGTCAGTTTTACGTTGCAAACGGTGAATTATCC 19031 |||| || || || || |||| ||| |||||||||||||| || ||||||| || || Sbjct 14147 ATGGCGCTGCCGCCGTGCCACATGTTCTGTCAGTTTTACGTAGCTGACGGTGAGTTGTCG 14088 Query 19032 TGCCAAGTATACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGA 19091 ||||| | |||||| | || | || ||||| || || || || ||||| || || | Sbjct 14087 TGCCAGATGTACCAGCGCTCAGCTGACATGGGGCTCGGCGTCCCATTCAATATCGCCAGC 14028 Query 19092 TATGCACTTCTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACCGGAGATTTAATT 19151 || || || || || | |||| || || || |||| | ||| |||| || || ||| Sbjct 14027 TACGCGCTGCTAACGCGCTTAGTGGCACAGGTGGCAGGTTTGAAACCCGGCGAGTTTATT 13968 Query 19152 CATACAATGGGGGATGCACATATTTACTTGAATCA 19186 ||| || || || || ||| | || |||| || Sbjct 13967 CATGTCATTGGTGACGCGCATGTGTATCTGAACCA 13933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399445153809870