Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq8339 96.9 3e-16 >seq8339 Length=1326 Score = 96.9 bits (106), Expect = 3e-16 Identities = 96/124 (77%), Gaps = 3/124 (2%) Strand=Plus/Minus Query 14516 TATTATGGCAAATGGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCAC 14575 |||||||| || || |||||||||||||||||| ||||| |||||||| ||||| Sbjct 519 TATTATGGTAACAGGTTCAGTAAAATGGTTTAACGACTCAAAAGGTTTTGGCTTCATCAC 460 Query 14576 TTCAGAAGAAGGCA---AAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATT 14632 | | || | ||| ||||||||||||| |||||||| || || ||||||| || || Sbjct 459 TCCTGACAATGGCGGCGAAGATTTGTTCGCACACTTCTCTGCGATTCAATCTGCAGGCTT 400 Query 14633 CAAA 14636 |||| Sbjct 399 CAAA 396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48447628770156