Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_003278.1
Length=35580
Score E
Sequences producing significant alignments: (Bits) Value
seq6336 462 5e-126
seq6992 448 1e-121
seq6715 408 1e-109
seq6999 156 1e-33
seq8228 136 9e-28
>seq6336
Length=1727
Score = 462 bits (512), Expect = 5e-126
Identities = 825/1182 (70%), Gaps = 59/1182 (5%)
Strand=Plus/Minus
Query 3634 GCTTGGGCCTTGCTGGCCGACAGGAATATCTGGTTGCGCCCCGTTTCCAGCGCGTCGATC 3693
|| || |||||| ||| || ||| ||||| |||||||| || ||||| ||||||
Sbjct 1360 GCCTGCGCCTTGGAGGCGCTCAAGAAAATCTGATTGCGCCCGGTGGTGAGCGCATCGATC 1301
Query 3694 AGCGCCTCGCGGGCGAAGTAGAACGTGGCGCCGATCTGCCGCGACTTGAGAATCACGCGG 3753
||||| ||||| |||||||| ||||| || |||||||| ||||||||||| || | ||||
Sbjct 1300 AGCGCTTCGCGAGCGAAGTAAAACGTTGCACCGATCTGGCGCGACTTGAGGATGATGCGG 1241
Query 3754 GTTCGCTGATTACCCGCGCGGTACCAGTCTTTCTGGTAGTCGAAGCAACCGTCGAGGAAG 3813
|| |||| || || || |||||||| || ||||||||||||||| ||||||| |||
Sbjct 1240 GTGCGCTCGTTGCCGGCCCGGTACCAATCGCGCTGGTAGTCGAAGCAGCCGTCGACGAAC 1181
Query 3814 GCCTCGACCAGTTTCTCGGTCAGTTCCTCACTGATGTCGTTGCGCTTCGGCTTGCGCTTG 3873
|| | ||| | |||| | |||| ||| ||| |||||||||||| || || |||
Sbjct 1180 GCGGTGGTCAGCTGCTCGACCTGTTCTTCAGTGAAGTCGTTGCGCTTGGGTTTTTTCTTT 1121
Query 3874 GGACCTTCGTTACGCTTGGCAAGCTCGGGGTTCAGGTCGGTTTCCGTACCACCGCCCTGG 3933
|| | |||| || ||||| | | || ||||| |||| ||| | || ||||| |||
Sbjct 1120 GGCGCAGCGTTGCGATTGGCGACAGCCGGATTCAGATCGGCTTCGTTGCCGCCGCCTTGG 1061
Query 3934 TAGCGCTGGATCCGCGCCTGGCGCTCAAGCTGCCGATGCAGCAGGTCGATTTCCTTGTAG 3993
||||||||||| |||||||||||||| | ||||||||||||||| || ||||||||| |
Sbjct 1060 TAGCGCTGGATGCGCGCCTGGCGCTCCAACTGCCGATGCAGCAGATCAATTTCCTTGAAA 1001
Query 3994 TCACCGCCGGTCTTGCCGTCCTTCAGGATCAACTGAACCAACCGGGCTTCCAGGGCGCCC 4053
|| ||||||| ||| | ||||| |||| | |||||| || ||||| || |||||
Sbjct 1000 TCGCCGCCGGACTTTTCCGGCTTCATAATCAGCACAACCAAGCGCGCTTCGAGTGCGCCA 941
Query 4054 CCGATCCGTTCTACGCTGTCGGCCCGGTCCCATCCGTCGCGGTCCTTCCATGAGTGAAGG 4113
||||| || || ||| |||| || || ||||| |||| || |||||| ||| |
Sbjct 940 CCGATGCGCTCAACGTTGTCTGCGCGATCCCACTCGTCACGCGACTTCCAGCTGTGTACA 881
Query 4114 GTCTTGTCCTTCTCGCCCAGGTGGTCGGCG--ATGTCGCAGACACGCCAGCCCATCCAGT 4171
||||| || |||||||| | ||| | ||| || ||| || ||||| ||||||||||
Sbjct 880 GTCTTCTCGTTCTCGCCGA--TGGCCTGCGCAATTTCGGTCACGCGCCATCCCATCCAGT 823
Query 4172 ACAGGAATTTGGCCTGGCGGCGGTTGTCACGGATGGGAATTTCGACGGCAGCG---TTCA 4228
||||||| |||||||| | |||| |||| || || | | | |||| || | ||
Sbjct 822 ACAGGAACTTGGCCTGTCTGCGGGTGTC---CATCGGGAGCTGGGTGGCAACGCTTTGCA 766
Query 4229 TGGCGCAGATGCTGCCGCCCACC-CT--CGCCCCTCAGT--AGCGCCGCCCCTTGTAGCT 4283
|| || | | ||| ||||||| || ||| |||| | || ||| |||
Sbjct 765 TGCCGACCAGGGTGCGGCCCACCTCTTAATCCCGACAGTTCAACGACGC-----GTAATC 711
Query 4284 CCGCGCCCTACAATCCCGCT--TGA--TTGCTGGGCCGCGCG-CGCGTCCCGAACATGCC 4338
| | |||| || | | | |||||| | | ||| ||||| || ||||
Sbjct 710 GCCTGGTTTACA----CGGTGATTACGTTGCTGCGTTGTGCGTCGCGT-TTGACCATG-- 658
Query 4339 CCTCATTGCCATGCACCCCGCATCAGCCGCATTGAGGACTCCC------GGCATG---AA 4389
|||| || | |||||| |||| ||||| ||| | || | ||
Sbjct 657 GGTCATCGCAA------ACGCATCCAGCGCA--AAGGACACCCATGTCGGCCAAGGCCAA 606
Query 4390 GAAATTCCGCAGCAAATGGTTCCGCATCGCCGTCGAAGGGGCGACCACGGACGGCCGCAA 4449
||| ||||| ||| ||||||||| | ||||||||||| || ||||| || |||||||
Sbjct 605 GAAGTTCCGTTCCAACTGGTTCCGCGTGGCCGTCGAAGGCGCCACCACCGATGGCCGCAC 546
Query 4450 CATCGAGCGCGACTGGATCGAGCAGATGGCCGCGCAGTACGACCCGAACACCTACGGCGC 4509
||| | ||| ||||||||| | |||||||| ||| ||| | |||||| |||
Sbjct 545 GATCCAACGCAGCTGGATCGACGACATGGCCGCCACCTACAACCGTGAGACCTACAACGC 486
Query 4510 GCGGATCAACTGCGAGCACATCAAGTG-GGCCTG--GCCGG-CTGGTGAGTTCGGCGCCT 4565
|| ||| ||||||||| | | ||||| ||||| || | |||| | || |
Sbjct 485 CCGCATCTGGATCGAGCACAT---GCGCAGCCTGCTGCCGGACTCG-CCGTTCCGTGCGT 430
Query 4566 ATGGCGACGT-GCTGGCGTGCAAGGCGGAAGAGATCGACATCAACGGGCAGAAGAAGCTG 4624
||||||| || ||| ||| || || |||||| |||| ||| | || ||| |||
Sbjct 429 ATGGCGATGTCACTGCAGTG-AAAGCCGAAGAGGTCGAGATCGATGGCACCAAGCGCCTG 371
Query 4625 GCCCTCTTCGCCCAACTGGAGCCCAACCAGGCGCTGCTGGAACTGAACAAGCAGCGGCAG 4684
|| || || ||||| | ||||| | | | ||| | | |||||| ||||
Sbjct 370 GCGCTGTTTGCCCAGATCGAGCCGACCGCCGACCTGATCACCATCAACAAGTCCAAGCAG 311
Query 4685 AAGGTCTACACCTCGGTCGAGATCGATCCCAAGTTCGCCGACACCGGCAAGGCCTACTTG 4744
||| |||||||| ||||| | | || |||||| ||||||||||||| || |
Sbjct 310 AAGCTCTACACCAGCATCGAGGTGCAGGAGAAATTCGCCAACACCGGCAAGGCGTATCTC 251
Query 4745 GTCGGCCTGGCCATCACCGACTCCCCCGCCAGCCTGGGTACC 4786
||||||||||| |||||||||| || ||||||||||| |||
Sbjct 250 GTCGGCCTGGCGGTCACCGACTCGCCGGCCAGCCTGGGCACC 209
Score = 311 bits (344), Expect = 2e-80
Identities = 288/362 (80%), Gaps = 10/362 (3%)
Strand=Plus/Minus
Query 3175 CGCAGCTCGTCGATGTCGAACAGATCGCAGCCACGGGCCTCGGCATCGAGGATGGTGACG 3234
|||||||||||||| |||||||| |||||||||||| || ||| ||||||||| |||||
Sbjct 1717 CGCAGCTCGTCGATATCGAACAGGTCGCAGCCACGGCGCTGGGCGTCGAGGATGTTGACG 1658
Query 3235 ATCTGGCGCCAGATGCGGTCCTCGCACAGTCGCCCTTGCTG--CAGGGCGTCATGACTTA 3292
||||| |||||| |||||||| ||| | || || || | ||| ||||| || |
Sbjct 1657 ATCTGCCGCCAGGCGCGGTCCTGGCAGCGGCGACC--GCCGGCCAGCGCGTCGTGCGAGA 1600
Query 3293 CGTCGATCTTGATGCGATCGGCGGCCGGCTTGCCCTTGTTGAAGCGCTCGCCAGTCCAGA 3352
| ||||||| ||| || | || |||||||||||||||||| ||||||||| ||||| |
Sbjct 1599 CATCGATCTGGATCCGCTGCGCCGCCGGCTTGCCCTTGTTGCGGCGCTCGCCGGTCCAAA 1540
Query 3353 ATGTGTAGGCCTCATGCGCCA---TCGAACTGGGCGTCGAGAAGTAGGTCCGGCGGTAGC 3409
| ||||||||||| || |||| |||| || || |||||||||| ||| |
Sbjct 1539 ACGTGTAGGCCTCGTGGGCCATGCTCGA---TGGTGTGCTGAAGTAGGTCTTGCGCCACT 1483
Query 3410 GCTTCTGCATCGCCATACCGCTGGCGACCTTGTTCAGCTCCTTGAACTTGAACGTCCAGA 3469
||| ||||||||||| ||||||||||||||||||| || |||||| | | |||||||
Sbjct 1482 TCTTGTGCATCGCCATGCCGCTGGCGACCTTGTTCAATTCGTTGAACCCGTAGGTCCAGA 1423
Query 3470 AGAACTCGTCGAAGTAGAAGTTGCCGTGGTAGCCCTGGGCAGTCCGCGCGTTGGTGCCGA 3529
|||| |||||||||||||| |||||||||||||||||||| || || || ||||| ||||
Sbjct 1422 AGAATTCGTCGAAGTAGAAATTGCCGTGGTAGCCCTGGGCGGTGCGTGCATTGGTCCCGA 1363
Query 3530 GG 3531
||
Sbjct 1362 GG 1361
>seq6992
Length=1569
Score = 448 bits (496), Expect = 1e-121
Identities = 1079/1611 (67%), Gaps = 115/1611 (7%)
Strand=Plus/Minus
Query 17582 GCACTGGGCTTGCGTGCCCGGATCGATCAGGAGGTCGGTTGGCACAAGACCCTGTCGAAC 17641
|| || ||| |||||||| |||||| || || |||||||||| |||||| |||
Sbjct 1521 GCGCTCGGCCTGCGTGCCAAGATCGACACCGAACAGGGCTGGCACAAGAGCCTGTCCAAC 1462
Query 17642 GTCGCCGTCAACGGCGTGACCGGCATCAGCGCCGACGTGTTCTGGGACCTGCAGAGCCCC 17701
|| |||| ||||| ||||||||| | || ||| ||||| |||||| ||
Sbjct 1461 GTGCCCGTGGCTGGCGTCACCGGCATCTCCAAGGATGTGCATTGGGATCTGCAGGATCCG 1402
Query 17702 AGCACCGACGCCAACTACCTCAACGAGAACGAGGTCACCACCCTGGTGCAGG--AAGGGG 17759
|||||| ||| | |||||||||| ||| ||||||| |||||| | || ||
Sbjct 1401 GCCACCGATGCCGGCATCCTCAACGAGGGCGACATCACCACGCTGGTGACGTTCAACGGC 1342
Query 17760 GATTCCGTTTCTGGGGTTCGCGCACCTGCAGCGATGATCCGCTGTTCGCCTTCGAGAACT 17819
| || |||||||| |||||||| ||| || || |||||||||||||||
Sbjct 1341 CAG--CGCTTCTGGGGATCGCGCACGTGCGCGGAGGACAACATGTTCGCCTTCGAGACGG 1284
Query 17820 ACACCCGCACCGCCCAGGTGCTGGCCGACACTATCGCCGAAGCGCACATGTGGGCG---- 17875
||| |||||||| ||| | ||||||||||| |||||||||| || |||| ||
Sbjct 1283 CCACGCGCACCGCGCAGATCCTGGCCGACACCATCGCCGAAG-GC----GTGG-CGTTCT 1230
Query 17876 --GTTGACAAGCCCATGCACCCGTCACTGGTGCGCGACATCCTTGAGGGCGTGAACGCGA 17933
|| ||||| || |||||||| || ||||| | || | | || | ||||| |
Sbjct 1229 ACGTCGACAAACCGATGCACCCCTCGCTGGTCAGGGATCTGATCGAAACGATCAACGCCA 1170
Query 17934 AGTTCCGCGAGCTCAAGGGGCTCGGTCTGATC-ATCGACGCCCAGGCCTGGTACGACCCC 17992
|||||||||| || ||| | |||| || | ||||| ||| | |||||||||||| |
Sbjct 1169 AGTTCCGCGACCTGAAGTCG-TCGGGCTACTTGATCGATGCCAACGCCTGGTACGACGGC 1111
Query 17993 AACGTGAACGACAAGGACACGCTCAAGGCCGGCAAGCTGCGCATCACCTACGACTACACC 18052
| || ||| | ||||||| | ||| |||||||||| |||||||||||
Sbjct 1110 ATGGTCAACAGCGCCACCACGCTCGCCGATGGCGCGCTGCGCATCGATTACGACTACACG 1051
Query 18053 CCGGTGCCGCCGCTCGAGGACCTGACCTTCTTCCAGAAGATCACCGACAGCTATCTCGTC 18112
|||||||| ||||| ||| || || | | | ||||||||||| |||||| || | |
Sbjct 1050 CCGGTGCCACCGCTGGAGAACTTGCAGCTGTACAAGAAGATCACCACCAGCTACCTGGCC 991
Query 18113 GACTTCGCCAGCCGCGTCAACGCCTGACGCCCAGCGCTCCCCGGACGGGGAGCCGACCCA 18172
||||||||| ||||||||||| | |||| | ||| | ||
Sbjct 990 GACTTCGCCGAACGCGTCAACGCGTAACGC--------------------ACCCGCCTCA 951
Query 18173 CCTGATTCCCGGAGAGCCCTACCATGGCCATGCCGCGCAAGCTCAAGAACATGAACCTCT 18232
|||||||||||| || ||||||| |||| || ||||| | ||||| |
Sbjct 950 ---GATTCCCGGAGAACC---CCATGGCTTTGCCCAAGAAACTCAAAGCGCTCAACCTGT 897
Query 18233 TCAACGACGGCGGTAGCTACCAGGGC---GTCGT-GAAGTCCTGCACCCTGCCCCCGCTG 18288
|||||||||| | ||||| | ||| || || ||||| | |||||| |||||
Sbjct 896 TCAACGACGGTGAGAGCTATCTCGGCCAGGTGGTCGAAGT----GAAGCTGCCCACGCTG 841
Query 18289 GCCCGCAAGATGGAGGCCTTCCGCGGGGGCGGCATGAACGGCCCGGTCAAGGCCGACCTA 18348
||||||||||||||| | ||||| ||||| ||||| |||||||| |||| |
Sbjct 840 TCCCGCAAGATGGAGGAGTATCGCGGCGGCGGTATGAATGGCCCGGT------CGACATC 787
Query 18349 GGCTTCGACGATGACGGCATCCAGTTCGAGTGGACCCTCGGCGGCCTGGATCTGACAGC- 18407
| ||||| | | || ||| || |||| |||| ||||||||| ||| | ||||
Sbjct 786 GACTTCGGCCAGGAGAAGATCGAGCTCGAATGGAAGTGCGGCGGCCT-GATGCG-CAGCG 729
Query 18408 -CCTCAAGCAGTACGGCGCAGTCAGTGCCAACGGCGTCATGCTGCGCTTCGCCGGCTCAT 18466
|| || ||||||||||| || ||||| ||| ||||||||| |||||| | |
Sbjct 728 TACTGAATCAGTACGGCGCCACCACGCACAACGCCGTGCAGCTGCGCTTTGCCGGCGCCT 669
Query 18467 TCCAGCAAGACGATACCGGCGAAGTCACGTCCGTCGAAATCGTCGTTCGCGGCCGGCACG 18526
||||| |||||| || ||| || | || ||||| || || |||||||| |||
Sbjct 668 ACCAGCGCGACGATTCCACCGAGGTGGATGCGGTGGAAATTGTTGTGCGCGGCCGTCACA 609
Query 18527 AGACCATCGAAATGGGTGACGCCCAGCCCGGCGAAGACACCGAGCACAAGATCACCACCA 18586
|| || || ||| || | || ||||||| ||||||||| | ||| ||
Sbjct 608 AGGAGATTGATCCCGGTACCGGCAAGTCCGGCGATGACACCGAGTTTTCGGTCAAGACGT 549
Query 18587 CCTGCAGCTACTACAAGCTCGTCGTCAACGGCGAGGAAGTCATCGAGATCGACCTGCTGA 18646
| ||||||||||||||| ||||||||| | || ||||||||||| || |||
Sbjct 548 CGGCCAGCTACTACAAGCTGAGTATCAACGGCGTGCCCGTAATCGAGATCGATTTGATGA 489
Query 18647 ACTTCGTCGAGAAGGTCAACGGCAAGGACCTGCTCGAGGCACAGCGCAAGGCCATCG--G 18704
|| | |||||| ||||||||| ||| ||||| | | || ||| ||||||| |
Sbjct 488 ACATGATCGAGATCGTCAACGGCGTGGATCTGCTTGCCCCTCACCGCCGCGCCATCGGTG 429
Query 18705 CCTGTAATCCCTTCCCGCCGGCCCGGCCGGCGGTTTCTCTCCCCCTTGGATACCGACGCC 18764
|||| ||||||| ||| | | |||| ||| |||| |||| || ||| ||
Sbjct 428 CCTG---ACCCTTCCGGCCTGGC--GCCGCCGG---GCCTCCGCCTT-GAGACC--TTCC 380
Query 18765 CATGAAAACCGAACAGACTCCCGCTGACCTGCAGAACGCTCCCGACAACGTCGTCCCCCT 18824
|||| | | ||||| |||| | | | | |||||
Sbjct 379 GATGA----------------CCCCGACCT-------TTTCCCCA----GCCATTCCCCT 347
Query 18825 CGACCAGCCGATCAAGCGCGGCGCCCAGTCCATCGAATCG--CTCACCCTGCGCAAGCCC 18882
||||||||| |||| |||||||| ||| ||||| | || |||| | |||||||||
Sbjct 346 CGACCAGCCCATCACGCGCGGCGAGCAGACCATC--ACCGACCTCAAGGTCCGCAAGCCC 289
Query 18883 TCCTCTGGCGAACTGCGCGGCCTGCACCTGCTCGACCTGCTGCAGTTCGATGTGGCCGCG 18942
| | ||||||||||||||||| | || |||| |||||||| | ||||| |||||
Sbjct 288 GGCGCAGGCGAACTGCGCGGCCTCAAGCTCACCGACGTGCTGCAGCTGGATGTCACCGCG 229
Query 18943 ACCATCAA-AATCCTGCCGCGCATCAGCCAGCCGACCATCACCGAGCCCGAGGCCACCGG 19001
| ||| | | ||||| ||||| | ||| || | ||| |||| | || |
Sbjct 228 -CTGGCAACACTGCTGCCTCGCATTTCCTCGCCCACGCTGACCACCGCCGACGTCAATGC 170
Query 19002 CATGGACCCGGCCGACCTCCTTGCCTGCGGCCAGGTGATCGCCGGTTTTTTGC-TGCAGA 19060
||||| ||||||||||| || || ||||||| | | || |||||||| | ||| ||
Sbjct 169 GATGGATCCGGCCGACCTGCTGGCGGTAGGCCAGGAGGT-GCAGGTTTTTTTCTTGCCGA 111
Query 19061 AG---CGGGCGAAGGCAGCCTCCCTGATCGCGTAGAAAACGCCATGGCCGACCTGGCCGT 19117
|| | | | | || | | || || ||||||| | || ||||||||| | || |
Sbjct 110 AGGCCCAGAGGGAAGCGGATTTCCCGACTGCGTAGAGGATGCGATGGCCGACATCGCGGC 51
Query 19118 GACGTTTCACTGGGCGCCGGACCATATGGACCGGCT-CTCGCTCACCGAAC 19167
| || |||||| ||||| | ||||| ||||| ||||| |||||
Sbjct 50 CATCTTCCACTGGCCGCCGTCTGAAATGGA-CGGCTGGTCGCTGCACGAAC 1
>seq6715
Length=1635
Score = 408 bits (452), Expect = 1e-109
Identities = 749/1090 (69%), Gaps = 34/1090 (3%)
Strand=Plus/Plus
Query 29358 CGGTGGCCACCATCGATTACCTGGGCTACAGCCGGGAGCATGCCTGCTACGTTCTGGGCG 29417
|||||| | ||||||| | | ||||||||||| ||| || | ||| | || ||||
Sbjct 88 CGGTGGACGCCATCGACTTCGTGGGCTACAGCAAGGATCACCGCGCCTATTTGCTCGGCG 147
Query 29418 ACGTGGCGGTGCGCGGCGGCGTGATCGAGAAGGCCAACGCCGAAGACTTCTTCGAGTTCC 29477
|| |||| ||||||| ||||| | | | || |||||||| || |||| |||||||||
Sbjct 148 ACATGGCCGTGCGCGACGGCGAGCTGGTGACGGCCAACGAGGAGGACTATTTCGAGTTCG 207
Query 29478 AGAAGCTGCGCCTGAAGACCCTGCAGCGCTCGATCAAGCTGCAGATCGCCACCGACGCCA 29537
| |||||||| || |||||| |||| || ||| || ||||| |||| ||
Sbjct 208 ACAAGCTGCGTCTTAAGACCACGCAGAAATCCATCCGTTTGGAGATCCAGCGCGACACCG 267
Query 29538 AGGACTACCGCCCCGAGTGGCTGGACTGGCTGTGGACCTGCTTCGGCGCCAAGGGCCTGG 29597
||| | |||| || ||||| ||||||||| ||||||||| | | ||| |||
Sbjct 268 AGGCGTTCCGCGTGGATTGGCTACCGTGGCTGTGGCAGTGCTTCGGCACGCACGGCATGG 327
Query 29598 TGGCGCTGGCATTCTGGTTCGGCTCGCTGTTCGCGGAGCAGATCCGCGCCGAGTTCCAGT 29657
| || || | |||||||| |||||| ||||||| |||||||||||||||| | | ||
Sbjct 328 TCGCCATGACGTTCTGGTTTGGCTCGTTGTTCGCCGAGCAGATCCGCGCCGGGCACAAGA 387
Query 29658 CCTTTCCGTTCCTCGAGGCCACCGGCGAGGCCGGTGCCGGCAAATCCACGCTGATCACCT 29717
|||||| ||||| || ||||| || || ||||| |||||||| |||||||| | || |
Sbjct 388 GCTTTCCTTTCCTTGAAGCCACTGGTGAAGCCGGCGCCGGCAAGACCACGCTGCTGACGT 447
Query 29718 TCCTGTGGAAGCTGCTCGGCCGGGCGGACGAGGAAGGCCAGGACCCGTCGAAGATGACCA 29777
|||||||||||||||| ||||| ||||| | || ||| |||||| | ||| | |||
Sbjct 448 TCCTGTGGAAGCTGCTGGGCCGATCGGACTACGAGGGCTTCGACCCGGCCAAGTCGTCCA 507
Query 29778 AGGCGGGCC-TGCGC-CGC--TGGCTGACCCAGCTGTCGAACATGCCAATGGTCATGCTC 29833
|||| |||| ||||| ||| ||| | ||| |||| ||||| | ||| ||||
Sbjct 508 AGGCCGGCCGTGCGCGCGCCATGGGT----CAGGTGTCCGGTATGCCCGTCGTCCTGCTG 563
Query 29834 GAGGCCGACCGCAGCGACANNNNNNNNNNNNNNNNNNNNNNCAAGTCCTTCGACTGGGAC 29893
|| ||||| || ||||| |||| | || || |||||
Sbjct 564 GAAGCCGATCGAAGCGA------GCCAGACAAAGCGCATTCCAAGACGTTTGAGTGGGAT 617
Query 29894 GAGTTCAAGCCGCTGTTCAACGGTCGCGCGTTGG----GCGTGACCGGCCAGAAGACCGC 29949
||| | ||| | ||| ||| || || ||| |||| ||| | | |
Sbjct 618 GAGCTGAAGGACTTCTTCGGCGGCGGCACGCTGGCAACGCGT----GGCGTGCGCAATGG 673
Query 29950 CGGCAACGAGACCTACGAGCCCCCCTTCCGCGGCACCCTGGTGATGAGCCAGAACGCCAC 30009
||||||||||||||||||||| || || |||||||| | ||||| | |||||||||| |
Sbjct 674 CGGCAACGAGACCTACGAGCCGCCGTTTCGCGGCACGATCGTGATCACCCAGAACGCCGC 733
Query 30010 GGTGCAGGCCTCCGAAGCGATCATGACCCGTATCGTGAAGCTGCACTTCATTCGCCCGGA 30069
||| | || |||||| ||| |||| |||||||| |||||||| |||| || ||| |
Sbjct 734 TGTGGACGCTAGCGAAGCAATCCTGACGCGTATCGTCAAGCTGCATTTCAAGCGGCCGCA 793
Query 30070 AATCACCCGCGAGAGCCAGGCCGCAGCCGACAACCTCAACCACCTGGGCGTGCTCGAGGT 30129
||||| ||| |||| ||| |||||||||||||| ||| || || ||
Sbjct 794 GGTCACCACCGAAAGCCGTATCGCGGCCGACAACCTCAATGCACTGCAGGTCGAAGAAGT 853
Query 30130 CAGCCACTTCCTGCTGATGGCCATCCGCGCCGAGGCCCGC-GTGCTGGAGTGCTTCCGCG 30188
|||||||||||| || ||||||||| | | || ||| | || || ||| |
Sbjct 854 CAGCCACTTCCTCGTGCGTGCCATCCGC-CAGGAGCGCGCAATCCTCGATCTGTTCGCTG 912
Query 30189 AGCGGCTGAAGGT-TCACAGCGCGACGCTGCGCGCTCTGAAACAG---ATTCGTATCGAG 30244
||||| ||||||| | || || | ||| ||||||| ||||| | || | |||
Sbjct 913 AGCGGGTGAAGGTGTTTGAG-GCCAAGCTTCGCGCTC---AACAGGATCTGCGCCTGGAG 968
Query 30245 CGGCTGATACTCAACCACGCGCAGATGATGGCCCTGGTCGACGCGCTGCGCCTGGTGGTG 30304
|| | || ||||||||||||||| |||| || ||||| ||||||||||| ||
Sbjct 969 CGTGTCATCAAGAACCACGCGCAGATGCTGGCGCTATTCGACTGTCTGCGCCTGGTTGTC 1028
Query 30305 CCGCTGTCCGAGCACCAGCTCGCCTGCGCTCAGCAGACCCTGATGACGATGGCCCTGGAG 30364
| || | || || | ||| | | || | || || ||||| |||||
Sbjct 1029 GCTCTACCTGACGACATGGTCGAGCAGACGCGGCTTGCGTTGTTGGACATGGCGCTGGAA 1088
Query 30365 CGCCAGGACGCCGTCAACGCCGACGCGCCCGA-GGTGGCCGAGTTCTGGGAGGTCTACGA 30423
|| || | || ||| ||| ||| | | ||| ||| ||| |||||||||||||||||
Sbjct 1089 CGACAAAAGGCGATCAGCGCAGAC-CACGCGATGGTCAACGAATTCTGGGAGGTCTACGA 1147
Query 30424 CTACCTCGAA 30433
|||||||||
Sbjct 1148 ATACCTCGAA 1157
>seq6999
Length=1567
Score = 156 bits (172), Expect = 1e-33
Identities = 325/479 (68%), Gaps = 9/479 (2%)
Strand=Plus/Minus
Query 22627 GCTGGGCTGGAGTGACAGCGGACTGGTCGACAAGGGCACCTACACCGTCGACGAAACCGA 22686
||||||||||| | || ||| ||||||||||| ||||||| || ||| ||||| ||
Sbjct 1268 GCTGGGCTGGAAAGCCACCGGCCTGGTCGACAAAGGCACCTTCATCGTGGACGAGGTGGA 1209
Query 22687 GCACAGCGGCGCGCCGGACGTGCTCAGCATCCGCGCCCGCTCAGCGGACCTGC--GCAAG 22744
| ||||||||||||| ||| | ||| | | ||||| || ||||| ||| |||
Sbjct 1208 GTACAGCGGCGCGCCCGACATCATCACCGTGCGCGCGCGTAGTGCGGATCTGACTGCA-- 1151
Query 22745 GGCCTGAAGGTCAAGCGCGAACGCAGTTGGAGCAGCCCGAAGACGCTGGGCGACGTGCTC 22804
| | || |||||| ||||| ||| || | | | || |||||| |||||||
Sbjct 1150 GACATGCGCACGCGGCGCGAGCGCAGCTGGCACAACACCA---CGTTGGGCGCCGTGCTC 1094
Query 22805 ACCGACATCGCCCTCG-GCAACAACCTGAAGCCGGTGCTCGCGCCGGCGCTGGCGGGCCT 22863
| | | ||| || ||| || ||| ||| | ||| ||||||||| ||
Sbjct 1093 AATACCCTGGCCGGCGAGCATGGAC-TGACCCCGCGCGTGGCGGAGGCGCTGGCACGCAC 1035
Query 22864 GCCGATCCTGCAGCTGGACCAGGCCAACGAGTCCGACGCCAACCTGCTGACACGCCTGGG 22923
| | | || || ||||||||||||||| ||| || ||||| || ||||||||
Sbjct 1034 TAAGTTGCCCCATCTCGACCAGGCCAACGAGAGCGATATGAATCTGCTCACGCGCCTGGG 975
Query 22924 CGAGGACTTCGATGCGGTGGCCACCGTGAAAGCCGGCTGCCTGCTCTGCCTGCCGGCCGG 22983
| || |||||||||||| ||||| || || || || || | | |||| |||
Sbjct 974 CCAGCGCTTCGATGCGGTCGCCACGGTCAAGGCAGGAGCATTGGTGTTTGCGCCGATCGG 915
Query 22984 TGGCGGCAAGACTGCCAGCGGCCTGGCGCTGCCGCACATCAACCTCACCCGCCAGGATGG 23043
| ||||| || || | |||| |||||||| ||| ||| || || | || ||
Sbjct 914 CGCCGGCACCACAGCGACCGGCAAACCGCTGCCGACTGTCACCCTGACGCGGCGCGAAGG 855
Query 23044 CGACCAGCACCGCTACCTGCAGGCCGACCGCGACAGCTACGACGGCGTGCGCGCGTACT 23102
|||||| ||||| ||| ||||||||||| |||| |||||||||||||||||
Sbjct 854 CGACCAACACCGTTACTCCGTTGCCGACCGCGATGCCTACACCGGCGTGCGCGCGTACT 796
>seq8228
Length=1342
Score = 136 bits (150), Expect = 9e-28
Identities = 394/582 (68%), Gaps = 31/582 (5%)
Strand=Plus/Minus
Query 6967 CGAGCGTACCCCGCGCCCC--GCCGGCTCGGGGCCGATCTGCCAGGTCCTCTCCTTC-CT 7023
|||||| |||||| ||| ||||||||||||| |||| | || | |||| || ||
Sbjct 1342 CGAGCGG-CCCCGCAACCCTCGCCGGCTCGGGGCTGATCCAC-AG---CACTCCATCGCT 1288
Query 7024 GAGCAGTGACGCCCCGACCACCGGCGACCTCAAGCGAGCAGCAGC-ATGAGCGGATTCAT 7082
| | |||||||||||||||||||||| ||| ||||| || | |||||||||||||
Sbjct 1287 GCG--GTGACGCCCCGACCACCGGCGATCTCTTCCGAGC--CATCCATGAGCGGATTCAC 1232
Query 7083 CGCCAACGGC----CCGGTCCCA-GCCGGGCAC-ATCAACAGCGATCCCTTCTGGCCCAC 7136
|||| |||| || | ||| ||| | | ||| || | || |||||||| |
Sbjct 1231 TGCCATCGGCACCACCAGCGCCACGCCTGATGCGATCGCCAATGCGCCGTTCTGGCCGGC 1172
Query 7137 CATCGAGCTCGAGCATGTGCGCGCGAACCTGCGCATCGACTCCAGCGTCGATCCA-GCGC 7195
|||| | | | |||||| |||| | ||||| | || || ||| || | | ||||
Sbjct 1171 GATCGCACCGGCGACTGTGCGAGCGAGCATGCGCTTGGATGGCACCGT-GACCGATGCGC 1113
Query 7196 GCCTCGAAGTTGCGGTCATTGCCGCGGTGATCAGCGTCAACCGCGAGCTGCGGGCCTGGC 7255
| || || |||| ||||| || | |||||| ||| ||| | | |||
Sbjct 1112 GTCTGCGCCACGCCCTCATCGCCGCCATGCTGGCGGTCAACGATGAGTTGCAGACATGG- 1054
Query 7256 GCCTTGA-GAAGATCGCGGCCGGCTATGCCGAACTCGCCCAGGTGCCGTCCGACAAGGTG 7314
|| || | || ||||| ||||| || | | || | ||||| | || ||
Sbjct 1053 GCGCAGACGCAGCAGGCGGCTGGCTACGCGGTGTTGACCGATGTGCCCAGCACCACTGTC 994
Query 7315 CGGGATA-CCTC-CGAACTG-GTGCAGCTGTATCTGCGCGCAGTGCAGTCTGCCACCGCC 7371
||| |||| || | | || |||||||| || ||||| || || |||||||||
Sbjct 993 ---GATGGCCTCTCGCGCCGCGTACAGCTGTACCTACGCGCCGTCGCGTGTGCCACCGCT 937
Query 7372 GCCGAAGTGGCCGAGCGCTACCGCTGGTACGACACCACCACCAGCGGCAACGACAAGGCC 7431
| ||| ||||| ||||| |||||| | | |||| |||| ||||| |||| | |||
Sbjct 936 GTCGAGGTGGCAGAGCGTTACCGCAGCTTCGACGCCACTGACAGCGCCAACCAGCGCGCC 877
Query 7432 CAGGACATCGCAACCACCATCGACGA-CTACCGCCGCGACCAGCGCTGGGCGATCCGCGA 7490
| ||| | || | | |||| ||| |||| ||||||||||||||||||| | |||||
Sbjct 876 GATGACCTGTCACCGAGCATCACCGAGCTAC-GCCGCGACCAGCGCTGGGCCGTGCGCGA 818
Query 7491 CTTTCTCAAGCGTCCCCGCACGACGGTGGAGCTGATCTGATG 7532
| | || | || |||| ||||||||||| ||||||||
Sbjct 817 TCTGCAGAACCTGCCGCGCAGCACGGTGGAGCTCATCTGATG 776
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 113718076696744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |