Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_003278.1 Length=35580 Score E Sequences producing significant alignments: (Bits) Value seq6336 462 5e-126 seq6992 448 1e-121 seq6715 408 1e-109 seq6999 156 1e-33 seq8228 136 9e-28 >seq6336 Length=1727 Score = 462 bits (512), Expect = 5e-126 Identities = 825/1182 (70%), Gaps = 59/1182 (5%) Strand=Plus/Minus Query 3634 GCTTGGGCCTTGCTGGCCGACAGGAATATCTGGTTGCGCCCCGTTTCCAGCGCGTCGATC 3693 || || |||||| ||| || ||| ||||| |||||||| || ||||| |||||| Sbjct 1360 GCCTGCGCCTTGGAGGCGCTCAAGAAAATCTGATTGCGCCCGGTGGTGAGCGCATCGATC 1301 Query 3694 AGCGCCTCGCGGGCGAAGTAGAACGTGGCGCCGATCTGCCGCGACTTGAGAATCACGCGG 3753 ||||| ||||| |||||||| ||||| || |||||||| ||||||||||| || | |||| Sbjct 1300 AGCGCTTCGCGAGCGAAGTAAAACGTTGCACCGATCTGGCGCGACTTGAGGATGATGCGG 1241 Query 3754 GTTCGCTGATTACCCGCGCGGTACCAGTCTTTCTGGTAGTCGAAGCAACCGTCGAGGAAG 3813 || |||| || || || |||||||| || ||||||||||||||| ||||||| ||| Sbjct 1240 GTGCGCTCGTTGCCGGCCCGGTACCAATCGCGCTGGTAGTCGAAGCAGCCGTCGACGAAC 1181 Query 3814 GCCTCGACCAGTTTCTCGGTCAGTTCCTCACTGATGTCGTTGCGCTTCGGCTTGCGCTTG 3873 || | ||| | |||| | |||| ||| ||| |||||||||||| || || ||| Sbjct 1180 GCGGTGGTCAGCTGCTCGACCTGTTCTTCAGTGAAGTCGTTGCGCTTGGGTTTTTTCTTT 1121 Query 3874 GGACCTTCGTTACGCTTGGCAAGCTCGGGGTTCAGGTCGGTTTCCGTACCACCGCCCTGG 3933 || | |||| || ||||| | | || ||||| |||| ||| | || ||||| ||| Sbjct 1120 GGCGCAGCGTTGCGATTGGCGACAGCCGGATTCAGATCGGCTTCGTTGCCGCCGCCTTGG 1061 Query 3934 TAGCGCTGGATCCGCGCCTGGCGCTCAAGCTGCCGATGCAGCAGGTCGATTTCCTTGTAG 3993 ||||||||||| |||||||||||||| | ||||||||||||||| || ||||||||| | Sbjct 1060 TAGCGCTGGATGCGCGCCTGGCGCTCCAACTGCCGATGCAGCAGATCAATTTCCTTGAAA 1001 Query 3994 TCACCGCCGGTCTTGCCGTCCTTCAGGATCAACTGAACCAACCGGGCTTCCAGGGCGCCC 4053 || ||||||| ||| | ||||| |||| | |||||| || ||||| || ||||| Sbjct 1000 TCGCCGCCGGACTTTTCCGGCTTCATAATCAGCACAACCAAGCGCGCTTCGAGTGCGCCA 941 Query 4054 CCGATCCGTTCTACGCTGTCGGCCCGGTCCCATCCGTCGCGGTCCTTCCATGAGTGAAGG 4113 ||||| || || ||| |||| || || ||||| |||| || |||||| ||| | Sbjct 940 CCGATGCGCTCAACGTTGTCTGCGCGATCCCACTCGTCACGCGACTTCCAGCTGTGTACA 881 Query 4114 GTCTTGTCCTTCTCGCCCAGGTGGTCGGCG--ATGTCGCAGACACGCCAGCCCATCCAGT 4171 ||||| || |||||||| | ||| | ||| || ||| || ||||| |||||||||| Sbjct 880 GTCTTCTCGTTCTCGCCGA--TGGCCTGCGCAATTTCGGTCACGCGCCATCCCATCCAGT 823 Query 4172 ACAGGAATTTGGCCTGGCGGCGGTTGTCACGGATGGGAATTTCGACGGCAGCG---TTCA 4228 ||||||| |||||||| | |||| |||| || || | | | |||| || | || Sbjct 822 ACAGGAACTTGGCCTGTCTGCGGGTGTC---CATCGGGAGCTGGGTGGCAACGCTTTGCA 766 Query 4229 TGGCGCAGATGCTGCCGCCCACC-CT--CGCCCCTCAGT--AGCGCCGCCCCTTGTAGCT 4283 || || | | ||| ||||||| || ||| |||| | || ||| ||| Sbjct 765 TGCCGACCAGGGTGCGGCCCACCTCTTAATCCCGACAGTTCAACGACGC-----GTAATC 711 Query 4284 CCGCGCCCTACAATCCCGCT--TGA--TTGCTGGGCCGCGCG-CGCGTCCCGAACATGCC 4338 | | |||| || | | | |||||| | | ||| ||||| || |||| Sbjct 710 GCCTGGTTTACA----CGGTGATTACGTTGCTGCGTTGTGCGTCGCGT-TTGACCATG-- 658 Query 4339 CCTCATTGCCATGCACCCCGCATCAGCCGCATTGAGGACTCCC------GGCATG---AA 4389 |||| || | |||||| |||| ||||| ||| | || | || Sbjct 657 GGTCATCGCAA------ACGCATCCAGCGCA--AAGGACACCCATGTCGGCCAAGGCCAA 606 Query 4390 GAAATTCCGCAGCAAATGGTTCCGCATCGCCGTCGAAGGGGCGACCACGGACGGCCGCAA 4449 ||| ||||| ||| ||||||||| | ||||||||||| || ||||| || ||||||| Sbjct 605 GAAGTTCCGTTCCAACTGGTTCCGCGTGGCCGTCGAAGGCGCCACCACCGATGGCCGCAC 546 Query 4450 CATCGAGCGCGACTGGATCGAGCAGATGGCCGCGCAGTACGACCCGAACACCTACGGCGC 4509 ||| | ||| ||||||||| | |||||||| ||| ||| | |||||| ||| Sbjct 545 GATCCAACGCAGCTGGATCGACGACATGGCCGCCACCTACAACCGTGAGACCTACAACGC 486 Query 4510 GCGGATCAACTGCGAGCACATCAAGTG-GGCCTG--GCCGG-CTGGTGAGTTCGGCGCCT 4565 || ||| ||||||||| | | ||||| ||||| || | |||| | || | Sbjct 485 CCGCATCTGGATCGAGCACAT---GCGCAGCCTGCTGCCGGACTCG-CCGTTCCGTGCGT 430 Query 4566 ATGGCGACGT-GCTGGCGTGCAAGGCGGAAGAGATCGACATCAACGGGCAGAAGAAGCTG 4624 ||||||| || ||| ||| || || |||||| |||| ||| | || ||| ||| Sbjct 429 ATGGCGATGTCACTGCAGTG-AAAGCCGAAGAGGTCGAGATCGATGGCACCAAGCGCCTG 371 Query 4625 GCCCTCTTCGCCCAACTGGAGCCCAACCAGGCGCTGCTGGAACTGAACAAGCAGCGGCAG 4684 || || || ||||| | ||||| | | | ||| | | |||||| |||| Sbjct 370 GCGCTGTTTGCCCAGATCGAGCCGACCGCCGACCTGATCACCATCAACAAGTCCAAGCAG 311 Query 4685 AAGGTCTACACCTCGGTCGAGATCGATCCCAAGTTCGCCGACACCGGCAAGGCCTACTTG 4744 ||| |||||||| ||||| | | || |||||| ||||||||||||| || | Sbjct 310 AAGCTCTACACCAGCATCGAGGTGCAGGAGAAATTCGCCAACACCGGCAAGGCGTATCTC 251 Query 4745 GTCGGCCTGGCCATCACCGACTCCCCCGCCAGCCTGGGTACC 4786 ||||||||||| |||||||||| || ||||||||||| ||| Sbjct 250 GTCGGCCTGGCGGTCACCGACTCGCCGGCCAGCCTGGGCACC 209 Score = 311 bits (344), Expect = 2e-80 Identities = 288/362 (80%), Gaps = 10/362 (3%) Strand=Plus/Minus Query 3175 CGCAGCTCGTCGATGTCGAACAGATCGCAGCCACGGGCCTCGGCATCGAGGATGGTGACG 3234 |||||||||||||| |||||||| |||||||||||| || ||| ||||||||| ||||| Sbjct 1717 CGCAGCTCGTCGATATCGAACAGGTCGCAGCCACGGCGCTGGGCGTCGAGGATGTTGACG 1658 Query 3235 ATCTGGCGCCAGATGCGGTCCTCGCACAGTCGCCCTTGCTG--CAGGGCGTCATGACTTA 3292 ||||| |||||| |||||||| ||| | || || || | ||| ||||| || | Sbjct 1657 ATCTGCCGCCAGGCGCGGTCCTGGCAGCGGCGACC--GCCGGCCAGCGCGTCGTGCGAGA 1600 Query 3293 CGTCGATCTTGATGCGATCGGCGGCCGGCTTGCCCTTGTTGAAGCGCTCGCCAGTCCAGA 3352 | ||||||| ||| || | || |||||||||||||||||| ||||||||| ||||| | Sbjct 1599 CATCGATCTGGATCCGCTGCGCCGCCGGCTTGCCCTTGTTGCGGCGCTCGCCGGTCCAAA 1540 Query 3353 ATGTGTAGGCCTCATGCGCCA---TCGAACTGGGCGTCGAGAAGTAGGTCCGGCGGTAGC 3409 | ||||||||||| || |||| |||| || || |||||||||| ||| | Sbjct 1539 ACGTGTAGGCCTCGTGGGCCATGCTCGA---TGGTGTGCTGAAGTAGGTCTTGCGCCACT 1483 Query 3410 GCTTCTGCATCGCCATACCGCTGGCGACCTTGTTCAGCTCCTTGAACTTGAACGTCCAGA 3469 ||| ||||||||||| ||||||||||||||||||| || |||||| | | ||||||| Sbjct 1482 TCTTGTGCATCGCCATGCCGCTGGCGACCTTGTTCAATTCGTTGAACCCGTAGGTCCAGA 1423 Query 3470 AGAACTCGTCGAAGTAGAAGTTGCCGTGGTAGCCCTGGGCAGTCCGCGCGTTGGTGCCGA 3529 |||| |||||||||||||| |||||||||||||||||||| || || || ||||| |||| Sbjct 1422 AGAATTCGTCGAAGTAGAAATTGCCGTGGTAGCCCTGGGCGGTGCGTGCATTGGTCCCGA 1363 Query 3530 GG 3531 || Sbjct 1362 GG 1361 >seq6992 Length=1569 Score = 448 bits (496), Expect = 1e-121 Identities = 1079/1611 (67%), Gaps = 115/1611 (7%) Strand=Plus/Minus Query 17582 GCACTGGGCTTGCGTGCCCGGATCGATCAGGAGGTCGGTTGGCACAAGACCCTGTCGAAC 17641 || || ||| |||||||| |||||| || || |||||||||| |||||| ||| Sbjct 1521 GCGCTCGGCCTGCGTGCCAAGATCGACACCGAACAGGGCTGGCACAAGAGCCTGTCCAAC 1462 Query 17642 GTCGCCGTCAACGGCGTGACCGGCATCAGCGCCGACGTGTTCTGGGACCTGCAGAGCCCC 17701 || |||| ||||| ||||||||| | || ||| ||||| |||||| || Sbjct 1461 GTGCCCGTGGCTGGCGTCACCGGCATCTCCAAGGATGTGCATTGGGATCTGCAGGATCCG 1402 Query 17702 AGCACCGACGCCAACTACCTCAACGAGAACGAGGTCACCACCCTGGTGCAGG--AAGGGG 17759 |||||| ||| | |||||||||| ||| ||||||| |||||| | || || Sbjct 1401 GCCACCGATGCCGGCATCCTCAACGAGGGCGACATCACCACGCTGGTGACGTTCAACGGC 1342 Query 17760 GATTCCGTTTCTGGGGTTCGCGCACCTGCAGCGATGATCCGCTGTTCGCCTTCGAGAACT 17819 | || |||||||| |||||||| ||| || || ||||||||||||||| Sbjct 1341 CAG--CGCTTCTGGGGATCGCGCACGTGCGCGGAGGACAACATGTTCGCCTTCGAGACGG 1284 Query 17820 ACACCCGCACCGCCCAGGTGCTGGCCGACACTATCGCCGAAGCGCACATGTGGGCG---- 17875 ||| |||||||| ||| | ||||||||||| |||||||||| || |||| || Sbjct 1283 CCACGCGCACCGCGCAGATCCTGGCCGACACCATCGCCGAAG-GC----GTGG-CGTTCT 1230 Query 17876 --GTTGACAAGCCCATGCACCCGTCACTGGTGCGCGACATCCTTGAGGGCGTGAACGCGA 17933 || ||||| || |||||||| || ||||| | || | | || | ||||| | Sbjct 1229 ACGTCGACAAACCGATGCACCCCTCGCTGGTCAGGGATCTGATCGAAACGATCAACGCCA 1170 Query 17934 AGTTCCGCGAGCTCAAGGGGCTCGGTCTGATC-ATCGACGCCCAGGCCTGGTACGACCCC 17992 |||||||||| || ||| | |||| || | ||||| ||| | |||||||||||| | Sbjct 1169 AGTTCCGCGACCTGAAGTCG-TCGGGCTACTTGATCGATGCCAACGCCTGGTACGACGGC 1111 Query 17993 AACGTGAACGACAAGGACACGCTCAAGGCCGGCAAGCTGCGCATCACCTACGACTACACC 18052 | || ||| | ||||||| | ||| |||||||||| ||||||||||| Sbjct 1110 ATGGTCAACAGCGCCACCACGCTCGCCGATGGCGCGCTGCGCATCGATTACGACTACACG 1051 Query 18053 CCGGTGCCGCCGCTCGAGGACCTGACCTTCTTCCAGAAGATCACCGACAGCTATCTCGTC 18112 |||||||| ||||| ||| || || | | | ||||||||||| |||||| || | | Sbjct 1050 CCGGTGCCACCGCTGGAGAACTTGCAGCTGTACAAGAAGATCACCACCAGCTACCTGGCC 991 Query 18113 GACTTCGCCAGCCGCGTCAACGCCTGACGCCCAGCGCTCCCCGGACGGGGAGCCGACCCA 18172 ||||||||| ||||||||||| | |||| | ||| | || Sbjct 990 GACTTCGCCGAACGCGTCAACGCGTAACGC--------------------ACCCGCCTCA 951 Query 18173 CCTGATTCCCGGAGAGCCCTACCATGGCCATGCCGCGCAAGCTCAAGAACATGAACCTCT 18232 |||||||||||| || ||||||| |||| || ||||| | ||||| | Sbjct 950 ---GATTCCCGGAGAACC---CCATGGCTTTGCCCAAGAAACTCAAAGCGCTCAACCTGT 897 Query 18233 TCAACGACGGCGGTAGCTACCAGGGC---GTCGT-GAAGTCCTGCACCCTGCCCCCGCTG 18288 |||||||||| | ||||| | ||| || || ||||| | |||||| ||||| Sbjct 896 TCAACGACGGTGAGAGCTATCTCGGCCAGGTGGTCGAAGT----GAAGCTGCCCACGCTG 841 Query 18289 GCCCGCAAGATGGAGGCCTTCCGCGGGGGCGGCATGAACGGCCCGGTCAAGGCCGACCTA 18348 ||||||||||||||| | ||||| ||||| ||||| |||||||| |||| | Sbjct 840 TCCCGCAAGATGGAGGAGTATCGCGGCGGCGGTATGAATGGCCCGGT------CGACATC 787 Query 18349 GGCTTCGACGATGACGGCATCCAGTTCGAGTGGACCCTCGGCGGCCTGGATCTGACAGC- 18407 | ||||| | | || ||| || |||| |||| ||||||||| ||| | |||| Sbjct 786 GACTTCGGCCAGGAGAAGATCGAGCTCGAATGGAAGTGCGGCGGCCT-GATGCG-CAGCG 729 Query 18408 -CCTCAAGCAGTACGGCGCAGTCAGTGCCAACGGCGTCATGCTGCGCTTCGCCGGCTCAT 18466 || || ||||||||||| || ||||| ||| ||||||||| |||||| | | Sbjct 728 TACTGAATCAGTACGGCGCCACCACGCACAACGCCGTGCAGCTGCGCTTTGCCGGCGCCT 669 Query 18467 TCCAGCAAGACGATACCGGCGAAGTCACGTCCGTCGAAATCGTCGTTCGCGGCCGGCACG 18526 ||||| |||||| || ||| || | || ||||| || || |||||||| ||| Sbjct 668 ACCAGCGCGACGATTCCACCGAGGTGGATGCGGTGGAAATTGTTGTGCGCGGCCGTCACA 609 Query 18527 AGACCATCGAAATGGGTGACGCCCAGCCCGGCGAAGACACCGAGCACAAGATCACCACCA 18586 || || || ||| || | || ||||||| ||||||||| | ||| || Sbjct 608 AGGAGATTGATCCCGGTACCGGCAAGTCCGGCGATGACACCGAGTTTTCGGTCAAGACGT 549 Query 18587 CCTGCAGCTACTACAAGCTCGTCGTCAACGGCGAGGAAGTCATCGAGATCGACCTGCTGA 18646 | ||||||||||||||| ||||||||| | || ||||||||||| || ||| Sbjct 548 CGGCCAGCTACTACAAGCTGAGTATCAACGGCGTGCCCGTAATCGAGATCGATTTGATGA 489 Query 18647 ACTTCGTCGAGAAGGTCAACGGCAAGGACCTGCTCGAGGCACAGCGCAAGGCCATCG--G 18704 || | |||||| ||||||||| ||| ||||| | | || ||| ||||||| | Sbjct 488 ACATGATCGAGATCGTCAACGGCGTGGATCTGCTTGCCCCTCACCGCCGCGCCATCGGTG 429 Query 18705 CCTGTAATCCCTTCCCGCCGGCCCGGCCGGCGGTTTCTCTCCCCCTTGGATACCGACGCC 18764 |||| ||||||| ||| | | |||| ||| |||| |||| || ||| || Sbjct 428 CCTG---ACCCTTCCGGCCTGGC--GCCGCCGG---GCCTCCGCCTT-GAGACC--TTCC 380 Query 18765 CATGAAAACCGAACAGACTCCCGCTGACCTGCAGAACGCTCCCGACAACGTCGTCCCCCT 18824 |||| | | ||||| |||| | | | | ||||| Sbjct 379 GATGA----------------CCCCGACCT-------TTTCCCCA----GCCATTCCCCT 347 Query 18825 CGACCAGCCGATCAAGCGCGGCGCCCAGTCCATCGAATCG--CTCACCCTGCGCAAGCCC 18882 ||||||||| |||| |||||||| ||| ||||| | || |||| | ||||||||| Sbjct 346 CGACCAGCCCATCACGCGCGGCGAGCAGACCATC--ACCGACCTCAAGGTCCGCAAGCCC 289 Query 18883 TCCTCTGGCGAACTGCGCGGCCTGCACCTGCTCGACCTGCTGCAGTTCGATGTGGCCGCG 18942 | | ||||||||||||||||| | || |||| |||||||| | ||||| ||||| Sbjct 288 GGCGCAGGCGAACTGCGCGGCCTCAAGCTCACCGACGTGCTGCAGCTGGATGTCACCGCG 229 Query 18943 ACCATCAA-AATCCTGCCGCGCATCAGCCAGCCGACCATCACCGAGCCCGAGGCCACCGG 19001 | ||| | | ||||| ||||| | ||| || | ||| |||| | || | Sbjct 228 -CTGGCAACACTGCTGCCTCGCATTTCCTCGCCCACGCTGACCACCGCCGACGTCAATGC 170 Query 19002 CATGGACCCGGCCGACCTCCTTGCCTGCGGCCAGGTGATCGCCGGTTTTTTGC-TGCAGA 19060 ||||| ||||||||||| || || ||||||| | | || |||||||| | ||| || Sbjct 169 GATGGATCCGGCCGACCTGCTGGCGGTAGGCCAGGAGGT-GCAGGTTTTTTTCTTGCCGA 111 Query 19061 AG---CGGGCGAAGGCAGCCTCCCTGATCGCGTAGAAAACGCCATGGCCGACCTGGCCGT 19117 || | | | | || | | || || ||||||| | || ||||||||| | || | Sbjct 110 AGGCCCAGAGGGAAGCGGATTTCCCGACTGCGTAGAGGATGCGATGGCCGACATCGCGGC 51 Query 19118 GACGTTTCACTGGGCGCCGGACCATATGGACCGGCT-CTCGCTCACCGAAC 19167 | || |||||| ||||| | ||||| ||||| ||||| ||||| Sbjct 50 CATCTTCCACTGGCCGCCGTCTGAAATGGA-CGGCTGGTCGCTGCACGAAC 1 >seq6715 Length=1635 Score = 408 bits (452), Expect = 1e-109 Identities = 749/1090 (69%), Gaps = 34/1090 (3%) Strand=Plus/Plus Query 29358 CGGTGGCCACCATCGATTACCTGGGCTACAGCCGGGAGCATGCCTGCTACGTTCTGGGCG 29417 |||||| | ||||||| | | ||||||||||| ||| || | ||| | || |||| Sbjct 88 CGGTGGACGCCATCGACTTCGTGGGCTACAGCAAGGATCACCGCGCCTATTTGCTCGGCG 147 Query 29418 ACGTGGCGGTGCGCGGCGGCGTGATCGAGAAGGCCAACGCCGAAGACTTCTTCGAGTTCC 29477 || |||| ||||||| ||||| | | | || |||||||| || |||| ||||||||| Sbjct 148 ACATGGCCGTGCGCGACGGCGAGCTGGTGACGGCCAACGAGGAGGACTATTTCGAGTTCG 207 Query 29478 AGAAGCTGCGCCTGAAGACCCTGCAGCGCTCGATCAAGCTGCAGATCGCCACCGACGCCA 29537 | |||||||| || |||||| |||| || ||| || ||||| |||| || Sbjct 208 ACAAGCTGCGTCTTAAGACCACGCAGAAATCCATCCGTTTGGAGATCCAGCGCGACACCG 267 Query 29538 AGGACTACCGCCCCGAGTGGCTGGACTGGCTGTGGACCTGCTTCGGCGCCAAGGGCCTGG 29597 ||| | |||| || ||||| ||||||||| ||||||||| | | ||| ||| Sbjct 268 AGGCGTTCCGCGTGGATTGGCTACCGTGGCTGTGGCAGTGCTTCGGCACGCACGGCATGG 327 Query 29598 TGGCGCTGGCATTCTGGTTCGGCTCGCTGTTCGCGGAGCAGATCCGCGCCGAGTTCCAGT 29657 | || || | |||||||| |||||| ||||||| |||||||||||||||| | | || Sbjct 328 TCGCCATGACGTTCTGGTTTGGCTCGTTGTTCGCCGAGCAGATCCGCGCCGGGCACAAGA 387 Query 29658 CCTTTCCGTTCCTCGAGGCCACCGGCGAGGCCGGTGCCGGCAAATCCACGCTGATCACCT 29717 |||||| ||||| || ||||| || || ||||| |||||||| |||||||| | || | Sbjct 388 GCTTTCCTTTCCTTGAAGCCACTGGTGAAGCCGGCGCCGGCAAGACCACGCTGCTGACGT 447 Query 29718 TCCTGTGGAAGCTGCTCGGCCGGGCGGACGAGGAAGGCCAGGACCCGTCGAAGATGACCA 29777 |||||||||||||||| ||||| ||||| | || ||| |||||| | ||| | ||| Sbjct 448 TCCTGTGGAAGCTGCTGGGCCGATCGGACTACGAGGGCTTCGACCCGGCCAAGTCGTCCA 507 Query 29778 AGGCGGGCC-TGCGC-CGC--TGGCTGACCCAGCTGTCGAACATGCCAATGGTCATGCTC 29833 |||| |||| ||||| ||| ||| | ||| |||| ||||| | ||| |||| Sbjct 508 AGGCCGGCCGTGCGCGCGCCATGGGT----CAGGTGTCCGGTATGCCCGTCGTCCTGCTG 563 Query 29834 GAGGCCGACCGCAGCGACANNNNNNNNNNNNNNNNNNNNNNCAAGTCCTTCGACTGGGAC 29893 || ||||| || ||||| |||| | || || ||||| Sbjct 564 GAAGCCGATCGAAGCGA------GCCAGACAAAGCGCATTCCAAGACGTTTGAGTGGGAT 617 Query 29894 GAGTTCAAGCCGCTGTTCAACGGTCGCGCGTTGG----GCGTGACCGGCCAGAAGACCGC 29949 ||| | ||| | ||| ||| || || ||| |||| ||| | | | Sbjct 618 GAGCTGAAGGACTTCTTCGGCGGCGGCACGCTGGCAACGCGT----GGCGTGCGCAATGG 673 Query 29950 CGGCAACGAGACCTACGAGCCCCCCTTCCGCGGCACCCTGGTGATGAGCCAGAACGCCAC 30009 ||||||||||||||||||||| || || |||||||| | ||||| | |||||||||| | Sbjct 674 CGGCAACGAGACCTACGAGCCGCCGTTTCGCGGCACGATCGTGATCACCCAGAACGCCGC 733 Query 30010 GGTGCAGGCCTCCGAAGCGATCATGACCCGTATCGTGAAGCTGCACTTCATTCGCCCGGA 30069 ||| | || |||||| ||| |||| |||||||| |||||||| |||| || ||| | Sbjct 734 TGTGGACGCTAGCGAAGCAATCCTGACGCGTATCGTCAAGCTGCATTTCAAGCGGCCGCA 793 Query 30070 AATCACCCGCGAGAGCCAGGCCGCAGCCGACAACCTCAACCACCTGGGCGTGCTCGAGGT 30129 ||||| ||| |||| ||| |||||||||||||| ||| || || || Sbjct 794 GGTCACCACCGAAAGCCGTATCGCGGCCGACAACCTCAATGCACTGCAGGTCGAAGAAGT 853 Query 30130 CAGCCACTTCCTGCTGATGGCCATCCGCGCCGAGGCCCGC-GTGCTGGAGTGCTTCCGCG 30188 |||||||||||| || ||||||||| | | || ||| | || || ||| | Sbjct 854 CAGCCACTTCCTCGTGCGTGCCATCCGC-CAGGAGCGCGCAATCCTCGATCTGTTCGCTG 912 Query 30189 AGCGGCTGAAGGT-TCACAGCGCGACGCTGCGCGCTCTGAAACAG---ATTCGTATCGAG 30244 ||||| ||||||| | || || | ||| ||||||| ||||| | || | ||| Sbjct 913 AGCGGGTGAAGGTGTTTGAG-GCCAAGCTTCGCGCTC---AACAGGATCTGCGCCTGGAG 968 Query 30245 CGGCTGATACTCAACCACGCGCAGATGATGGCCCTGGTCGACGCGCTGCGCCTGGTGGTG 30304 || | || ||||||||||||||| |||| || ||||| ||||||||||| || Sbjct 969 CGTGTCATCAAGAACCACGCGCAGATGCTGGCGCTATTCGACTGTCTGCGCCTGGTTGTC 1028 Query 30305 CCGCTGTCCGAGCACCAGCTCGCCTGCGCTCAGCAGACCCTGATGACGATGGCCCTGGAG 30364 | || | || || | ||| | | || | || || ||||| ||||| Sbjct 1029 GCTCTACCTGACGACATGGTCGAGCAGACGCGGCTTGCGTTGTTGGACATGGCGCTGGAA 1088 Query 30365 CGCCAGGACGCCGTCAACGCCGACGCGCCCGA-GGTGGCCGAGTTCTGGGAGGTCTACGA 30423 || || | || ||| ||| ||| | | ||| ||| ||| ||||||||||||||||| Sbjct 1089 CGACAAAAGGCGATCAGCGCAGAC-CACGCGATGGTCAACGAATTCTGGGAGGTCTACGA 1147 Query 30424 CTACCTCGAA 30433 ||||||||| Sbjct 1148 ATACCTCGAA 1157 >seq6999 Length=1567 Score = 156 bits (172), Expect = 1e-33 Identities = 325/479 (68%), Gaps = 9/479 (2%) Strand=Plus/Minus Query 22627 GCTGGGCTGGAGTGACAGCGGACTGGTCGACAAGGGCACCTACACCGTCGACGAAACCGA 22686 ||||||||||| | || ||| ||||||||||| ||||||| || ||| ||||| || Sbjct 1268 GCTGGGCTGGAAAGCCACCGGCCTGGTCGACAAAGGCACCTTCATCGTGGACGAGGTGGA 1209 Query 22687 GCACAGCGGCGCGCCGGACGTGCTCAGCATCCGCGCCCGCTCAGCGGACCTGC--GCAAG 22744 | ||||||||||||| ||| | ||| | | ||||| || ||||| ||| ||| Sbjct 1208 GTACAGCGGCGCGCCCGACATCATCACCGTGCGCGCGCGTAGTGCGGATCTGACTGCA-- 1151 Query 22745 GGCCTGAAGGTCAAGCGCGAACGCAGTTGGAGCAGCCCGAAGACGCTGGGCGACGTGCTC 22804 | | || |||||| ||||| ||| || | | | || |||||| ||||||| Sbjct 1150 GACATGCGCACGCGGCGCGAGCGCAGCTGGCACAACACCA---CGTTGGGCGCCGTGCTC 1094 Query 22805 ACCGACATCGCCCTCG-GCAACAACCTGAAGCCGGTGCTCGCGCCGGCGCTGGCGGGCCT 22863 | | | ||| || ||| || ||| ||| | ||| ||||||||| || Sbjct 1093 AATACCCTGGCCGGCGAGCATGGAC-TGACCCCGCGCGTGGCGGAGGCGCTGGCACGCAC 1035 Query 22864 GCCGATCCTGCAGCTGGACCAGGCCAACGAGTCCGACGCCAACCTGCTGACACGCCTGGG 22923 | | | || || ||||||||||||||| ||| || ||||| || |||||||| Sbjct 1034 TAAGTTGCCCCATCTCGACCAGGCCAACGAGAGCGATATGAATCTGCTCACGCGCCTGGG 975 Query 22924 CGAGGACTTCGATGCGGTGGCCACCGTGAAAGCCGGCTGCCTGCTCTGCCTGCCGGCCGG 22983 | || |||||||||||| ||||| || || || || || | | |||| ||| Sbjct 974 CCAGCGCTTCGATGCGGTCGCCACGGTCAAGGCAGGAGCATTGGTGTTTGCGCCGATCGG 915 Query 22984 TGGCGGCAAGACTGCCAGCGGCCTGGCGCTGCCGCACATCAACCTCACCCGCCAGGATGG 23043 | ||||| || || | |||| |||||||| ||| ||| || || | || || Sbjct 914 CGCCGGCACCACAGCGACCGGCAAACCGCTGCCGACTGTCACCCTGACGCGGCGCGAAGG 855 Query 23044 CGACCAGCACCGCTACCTGCAGGCCGACCGCGACAGCTACGACGGCGTGCGCGCGTACT 23102 |||||| ||||| ||| ||||||||||| |||| ||||||||||||||||| Sbjct 854 CGACCAACACCGTTACTCCGTTGCCGACCGCGATGCCTACACCGGCGTGCGCGCGTACT 796 >seq8228 Length=1342 Score = 136 bits (150), Expect = 9e-28 Identities = 394/582 (68%), Gaps = 31/582 (5%) Strand=Plus/Minus Query 6967 CGAGCGTACCCCGCGCCCC--GCCGGCTCGGGGCCGATCTGCCAGGTCCTCTCCTTC-CT 7023 |||||| |||||| ||| ||||||||||||| |||| | || | |||| || || Sbjct 1342 CGAGCGG-CCCCGCAACCCTCGCCGGCTCGGGGCTGATCCAC-AG---CACTCCATCGCT 1288 Query 7024 GAGCAGTGACGCCCCGACCACCGGCGACCTCAAGCGAGCAGCAGC-ATGAGCGGATTCAT 7082 | | |||||||||||||||||||||| ||| ||||| || | ||||||||||||| Sbjct 1287 GCG--GTGACGCCCCGACCACCGGCGATCTCTTCCGAGC--CATCCATGAGCGGATTCAC 1232 Query 7083 CGCCAACGGC----CCGGTCCCA-GCCGGGCAC-ATCAACAGCGATCCCTTCTGGCCCAC 7136 |||| |||| || | ||| ||| | | ||| || | || |||||||| | Sbjct 1231 TGCCATCGGCACCACCAGCGCCACGCCTGATGCGATCGCCAATGCGCCGTTCTGGCCGGC 1172 Query 7137 CATCGAGCTCGAGCATGTGCGCGCGAACCTGCGCATCGACTCCAGCGTCGATCCA-GCGC 7195 |||| | | | |||||| |||| | ||||| | || || ||| || | | |||| Sbjct 1171 GATCGCACCGGCGACTGTGCGAGCGAGCATGCGCTTGGATGGCACCGT-GACCGATGCGC 1113 Query 7196 GCCTCGAAGTTGCGGTCATTGCCGCGGTGATCAGCGTCAACCGCGAGCTGCGGGCCTGGC 7255 | || || |||| ||||| || | |||||| ||| ||| | | ||| Sbjct 1112 GTCTGCGCCACGCCCTCATCGCCGCCATGCTGGCGGTCAACGATGAGTTGCAGACATGG- 1054 Query 7256 GCCTTGA-GAAGATCGCGGCCGGCTATGCCGAACTCGCCCAGGTGCCGTCCGACAAGGTG 7314 || || | || ||||| ||||| || | | || | ||||| | || || Sbjct 1053 GCGCAGACGCAGCAGGCGGCTGGCTACGCGGTGTTGACCGATGTGCCCAGCACCACTGTC 994 Query 7315 CGGGATA-CCTC-CGAACTG-GTGCAGCTGTATCTGCGCGCAGTGCAGTCTGCCACCGCC 7371 ||| |||| || | | || |||||||| || ||||| || || ||||||||| Sbjct 993 ---GATGGCCTCTCGCGCCGCGTACAGCTGTACCTACGCGCCGTCGCGTGTGCCACCGCT 937 Query 7372 GCCGAAGTGGCCGAGCGCTACCGCTGGTACGACACCACCACCAGCGGCAACGACAAGGCC 7431 | ||| ||||| ||||| |||||| | | |||| |||| ||||| |||| | ||| Sbjct 936 GTCGAGGTGGCAGAGCGTTACCGCAGCTTCGACGCCACTGACAGCGCCAACCAGCGCGCC 877 Query 7432 CAGGACATCGCAACCACCATCGACGA-CTACCGCCGCGACCAGCGCTGGGCGATCCGCGA 7490 | ||| | || | | |||| ||| |||| ||||||||||||||||||| | ||||| Sbjct 876 GATGACCTGTCACCGAGCATCACCGAGCTAC-GCCGCGACCAGCGCTGGGCCGTGCGCGA 818 Query 7491 CTTTCTCAAGCGTCCCCGCACGACGGTGGAGCTGATCTGATG 7532 | | || | || |||| ||||||||||| |||||||| Sbjct 817 TCTGCAGAACCTGCCGCGCAGCACGGTGGAGCTCATCTGATG 776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113718076696744