Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq276 107 2e-18 >seq276 Length=79158 Score = 107 bits (118), Expect = 2e-18 Identities = 92/114 (81%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 5644 GTTGAACAGCACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCAC 5703 ||||||||| | |||||||||||| |||||||| ||||| || || || || ||||| Sbjct 9967 GTTGAACAGGAGCACGCCCACGTTACCGCGGTAATCGGCATCGATGACACCAGCGCCAGT 10026 Query 5704 GTCGATGAAGTGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGTAGCA 5757 ||||||||| | ||| | ||| || || ||||| || ||||||||| ||||||| Sbjct 10027 GTCGATGAAATTCTTCAGCGCAAGACCCGAGCGAGGCGCCACGCGGGCGTAGCA 10080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429991053793232