Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq3496 95.1 2e-14 >seq3496 Length=3592 Score = 95.1 bits (104), Expect = 2e-14 Identities = 81/99 (82%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 165220 GCCCAAGTGGCGGAATTGGTAGACGCGCTGGGTTTAGGTTCCAGTGAATTAATTCGTGGA 165279 ||||| ||||||||||||||||||||||| | || |||| |||| | | |||||| Sbjct 1724 GCCCAGGTGGCGGAATTGGTAGACGCGCTAGTTTCAGGTATTAGTGTTTAACGACGTGGA 1665 Query 165280 GGTTCAAGTCCTCTCTTGGGCACTATTATGAA-AAAACA 165317 ||||| ||||||||||||||||| || | ||| |||||| Sbjct 1664 GGTTCGAGTCCTCTCTTGGGCACCATAAAGAATAAAACA 1626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627873129734400