Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_007710.1 Length=46643 Score E Sequences producing significant alignments: (Bits) Value seq6698 646 0.0 >seq6698 Length=1640 Score = 646 bits (716), Expect = 0.0 Identities = 438/490 (89%), Gaps = 1/490 (0%) Strand=Plus/Minus Query 35431 GACCCAGTCCTTGCAGGTGAAGTTGCTCGACCCGCGTTTCGGCGATCTGTGGCCGTTGCC 35490 |||||| |||||||||||||||||||||||||| || || |||||| | |||||| |||| Sbjct 815 GACCCACTCCTTGCAGGTGAAGTTGCTCGACCCACGCTTTGGCGATGTCTGGCCGCTGCC 756 Query 35491 GGCCTATGCCACCGAAGCCAGTGCAGGCATGGACCTGCGTGCCGCACTGGAGGCGCCGAT 35550 |||||| |||||||||||||| || |||||||||||||| ||||| ||||| |||||||| Sbjct 755 GGCCTACGCCACCGAAGCCAGCGCCGGCATGGACCTGCGCGCCGCGCTGGAAGCGCCGAT 696 Query 35551 GACGTTGCAGCCGGGCGATGCGGCGCTGATTCCCAGCGGCATCGCGATCCATCTGGCCGA 35610 |||| || ||||||||||||||||| ||||||||||||| |||||||||||| ||||||| Sbjct 695 GACGCTGGAGCCGGGCGATGCGGCGTTGATTCCCAGCGGTATCGCGATCCATTTGGCCGA 636 Query 35611 CCCGCAGCTGTGCGCGGTGATCCTGCCGCGCTCGGGGCTTGGCCATCGTCACGGCATCGT 35670 ||||||| ||||||||||||||||||||||||| ||||| ||||| || ||||||||||| Sbjct 635 CCCGCAGGTGTGCGCGGTGATCCTGCCGCGCTCCGGGCTGGGCCACCGCCACGGCATCGT 576 Query 35671 ACTCGGCAACGGTACCGGCCTCATCGATGCGGATTACCAGGGGTCGTTGTTGATCAGCAC 35730 || || ||||| ||||| ||||||||||| || |||||||| || || |||||||||| Sbjct 575 GCTGGGTAACGGCACCGGGCTCATCGATGCCGACTACCAGGGCCCGCTGCTGATCAGCAC 516 Query 35731 CTGGAATCGCGGCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAGCTGGT 35790 |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 515 CTGGAATCGCGGCCGCGAGGCCTTCACCATCGAGCCGGGCGACCGGATTGCGCAATTGGT 456 Query 35791 GATCCTGCCGGTCGTGCGCGTAGGCTTGCGAGTGGTGGACACTTTCGTCGACAGCGCGCG 35850 |||||| ||| |||||||||||||||||| ||||||||| |||||||| ||||||||||| Sbjct 455 GATCCTTCCGATCGTGCGCGTAGGCTTGCAAGTGGTGGATACTTTCGTGGACAGCGCGCG 396 Query 35851 CGGCGCGGGTGGATTCGGTCACACCGGCGTGCGCTGACTGGCTAAGTCAGATGAGCAAGG 35910 || |||||||||||||| ||||||||||||||||||| || |||| |||||||||| Sbjct 395 GGGAGCGGGTGGATTCGGCCACACCGGCGTGCGCTGAC-GGGGGAGTCTCATGAGCAAGG 337 Query 35911 CCAACGACCG 35920 | ||||| || Sbjct 336 CGAACGAGCG 327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 149114595814860