Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq6304 86.0 7e-12 >seq6304 Length=1738 Score = 86.0 bits (94), Expect = 7e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 153117 ATCCCGTTCACCGACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAG 153176 || || || ||| ||| |||| || || || |||||||| | ||| || | ||| Sbjct 536 ATTCCCTTTACCCCCCGAGCCAAACGGGTGCTTGAGCTGTCATGGGACGAAGCTCGGCAA 595 Query 153177 CTCGGCCACAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAG 153236 || || || ||||||||||| ||||||||||| ||||||| ||| || ||||| || || Sbjct 596 CTGGGTCATAACTACATCGGTACCGAGCATCTGCTGCTGGGCCTCATTCGCGAAGGCGAA 655 Query 153237 GGCGT 153241 ||||| Sbjct 656 GGCGT 660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526518844146720