Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq5177 104 3e-17 >seq5177 Length=2144 Score = 104 bits (114), Expect = 3e-17 Identities = 95/118 (81%), Gaps = 4/118 (3%) Strand=Plus/Plus Query 43942 CTGGAAGCGATCCGCTTCTACGTGTCGTTTACCTTCACGTTCAACTTTGCCGA--ACAAG 43999 ||||||||||||||||||||||| || ||| | | ||| ||||||||| |||| Sbjct 571 CTGGAAGCGATCCGCTTCTACGTCAGCTTCGCCTGCTCATTCGCCTTTGCCGAGCGCAAG 630 Query 44000 GTAAGATGGAAGGTAACGCGAAGATCATGCGTCTGATTGCCCGTGATGAAGCACTTCA 44057 || ||||||||| ||||| |||||||| || |||||||| ||||||||||| || || Sbjct 631 GT--GATGGAAGGCAACGCCAAGATCATCCGCCTGATTGCGCGTGATGAAGCCCTGCA 686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565508152946880