Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_018269.1 Length=31766 Score E Sequences producing significant alignments: (Bits) Value seq4651 102 2e-17 >seq4651 Length=2439 Score = 102 bits (112), Expect = 2e-17 Identities = 157/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 25053 TCACTTAAATCCATGGCGAAAGAATTTAATTGTCCAATGATCGCGTTATCACAGCTTAAC 25112 ||||||||| | |||||||||| | || ||| |||| || | |||||| | ||| Sbjct 1033 TCACTTAAAGCATTGGCGAAAGAGCTGGATGTGCCACTGATTGCCATCTCACAGTTGAAC 974 Query 25113 CGAGGTCTTGAAAACAGACAGGATAAGCGCCCAATTAACTCAGACTTGCGCGAGTCTGGC 25172 ||| || | || | | | || ||||| || | | ||||||||||| |||||| Sbjct 973 CGAAGTGTGGATCAACGGCCTGACAAGCGTCCGGTGATGAGTGACTTGCGCGAATCTGGC 914 Query 25173 GCGATAGAACAGGATGCTGATCTAATCGCATTGATATACCGAGACGAAGTGTATAACCCC 25232 ||||| ||||| ||||| ||| | ||| || ||||||| ||||| || ||||| Sbjct 913 GCGATTGAACAAGATGCCGATTTGATCATGTTCGTATACCGTGACGAGTACTACAACCCG 854 Query 25233 GACAGCTCTGACAAAGGCATTGCCGAGATTATCATTGGCAAACA 25276 ||||| |||| ||||| | || ||||| || || | ||| || Sbjct 853 GACAGTGCTGAAAAAGGGACGGCGGAGATCATTATCGCCAAGCA 810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 101515028344896