Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_019398.1 Length=178193 Score E Sequences producing significant alignments: (Bits) Value seq5177 104 3e-17 >seq5177 Length=2144 Score = 104 bits (114), Expect = 3e-17 Identities = 104/133 (78%), Gaps = 4/133 (3%) Strand=Plus/Plus Query 43516 CTGGAAGCGATCCGCTTCTACGTGTCGTTTACCTTCACGTTCAACTTTGCCGA--ACAAG 43573 ||||||||||||||||||||||| || ||| | | ||| ||||||||| |||| Sbjct 571 CTGGAAGCGATCCGCTTCTACGTCAGCTTCGCCTGCTCATTCGCCTTTGCCGAGCGCAAG 630 Query 43574 GCAAGATGGAAGGTAACGCGAAGATCATGCGTCTGATTGCCCGTGATGAAGCACTTCATC 43633 | ||||||||| ||||| |||||||| || |||||||| ||||||||||| || || | Sbjct 631 G--TGATGGAAGGCAACGCCAAGATCATCCGCCTGATTGCGCGTGATGAAGCCCTGCACC 688 Query 43634 AGAAAGGCACTCA 43646 || ||||| || Sbjct 689 TGACCGGCACCCA 701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570003473713680