Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_019398.1
Length=178193
Score E
Sequences producing significant alignments: (Bits) Value
seq5177 104 3e-17
>seq5177
Length=2144
Score = 104 bits (114), Expect = 3e-17
Identities = 104/133 (78%), Gaps = 4/133 (3%)
Strand=Plus/Plus
Query 43516 CTGGAAGCGATCCGCTTCTACGTGTCGTTTACCTTCACGTTCAACTTTGCCGA--ACAAG 43573
||||||||||||||||||||||| || ||| | | ||| ||||||||| ||||
Sbjct 571 CTGGAAGCGATCCGCTTCTACGTCAGCTTCGCCTGCTCATTCGCCTTTGCCGAGCGCAAG 630
Query 43574 GCAAGATGGAAGGTAACGCGAAGATCATGCGTCTGATTGCCCGTGATGAAGCACTTCATC 43633
| ||||||||| ||||| |||||||| || |||||||| ||||||||||| || || |
Sbjct 631 G--TGATGGAAGGCAACGCCAAGATCATCCGCCTGATTGCGCGTGATGAAGCCCTGCACC 688
Query 43634 AGAAAGGCACTCA 43646
|| ||||| ||
Sbjct 689 TGACCGGCACCCA 701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 570003473713680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |