Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq6661 84.2 3e-11 >seq6661 Length=1649 Score = 84.2 bits (92), Expect = 3e-11 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Minus Query 198926 ATATCATTTGGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCAC 198985 ||| ||| || ||| ||||||||| ||||||||||| || ||||||| || |||||| | Sbjct 323 ATAACATACGGGCCCATAGCTCAGT-GGTTAGAGCAGTCGGCTCATAACCGATTGGTCGC 265 Query 198986 TGGTTCGAGTCCAGTAGGGGCCACCA 199011 |||||| ||||||| ||| |||||| Sbjct 264 TGGTTCAAGTCCAGCTGGGCCCACCA 239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741337585501680