Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_019933.2 Length=43870 Score E Sequences producing significant alignments: (Bits) Value seq7310 87.8 5e-13 >seq7310 Length=1497 Score = 87.8 bits (96), Expect = 5e-13 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 18450 GCTGCAGAGATTGCTCGGTATCACCTAGGGCAAAACCTGTATCAGGGTAAGGACATTAGC 18509 || || ||||| || || || ||||| | |||| ||||| ||| |||||||| || Sbjct 1322 GCGGCCGAGATGGCGCGCTACCACCTGGCCCAAAGCCTGTTCCAGTACAAGGACATCGGC 1381 Query 18510 TTTGCTACAGACTTGGAGCATCTGTCTTACCGCCGTATGTCTGTCCTATCCCTGTCACAT 18569 ||||| |||| || || ||||| | ||||| |||||||| | | || | || || Sbjct 1382 TTTGCCCAAGACCTGCAGTATCTGACGTACCGACGTATGTCGATGTTGTCGATCTCGCAC 1441 Query 18570 GACCTCACACAGTGGGGGTTTAGTGGCAGCATC 18602 |||||||| ||||||||||| | || ||||| Sbjct 1442 GACCTCACGCAGTGGGGGTTCGGCGGGCGCATC 1474 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 140242269365024