Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_020837.1
Length=198013
Score E
Sequences producing significant alignments: (Bits) Value
seq5177 98.7 1e-15
>seq5177
Length=2144
Score = 98.7 bits (108), Expect = 1e-15
Identities = 95/122 (78%), Gaps = 0/122 (0%)
Strand=Plus/Minus
Query 116025 TCATCACGAGCAATCAGACCGATGATCTTTGCATTGCCTTCCATCATCTTGAGTTCACCA 116084
|||||||| |||||||| | ||||||||| || ||||||||||||| |||| | || ||
Sbjct 677 TCATCACGCGCAATCAGGCGGATGATCTTGGCGTTGCCTTCCATCACCTTGCGCTCGGCA 618
Query 116085 AAAGCAAACGAGCAAGCGAAAGAAACATAGAAACGAATACCCTCAAGGATATACACATTC 116144
|| || || ||||| ||||| || ||||| || || | || ||||||| ||| |||
Sbjct 617 AAGGCGAATGAGCAGGCGAAGCTGACGTAGAAGCGGATCGCTTCCAGGATATTCACGTTC 558
Query 116145 AT 116146
||
Sbjct 557 AT 556
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633417891932880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |