Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq5730 82.4 4e-11 >seq5730 Length=1907 Score = 82.4 bits (90), Expect = 4e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 61715 TGGCGCTGATGCCGGATGCCCACTCGGGCAAGGGATCTGCGGTCGGCACCGTCATCCCCA 61774 ||||| ||||||| || | ||| ||||||||| | | || ||| | || ||||| | Sbjct 1496 TGGCGGTGATGCCCGACGTGCACCTGGGCAAGGGCGCAACCGTGGGCTCGGTGATCCCGA 1437 Query 61775 CCAAGGGCGCTGTCATTCCGGCCGCTGTTGGGGTGGACATCGGCTGCGGCATG 61827 || || || |||| |||||||| ||||| ||||| ||||||||||||||| Sbjct 1436 CCCGCGGTGCCATCATCCCGGCCGCGGTTGGCGTGGATATCGGCTGCGGCATG 1384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258893059919736