Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq6643 111 1e-19 >seq6643 Length=1653 Score = 111 bits (122), Expect = 1e-19 Identities = 131/177 (74%), Gaps = 3/177 (2%) Strand=Plus/Plus Query 95671 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95730 ||||||||||| ||| || ||||| |||| |||||||| || || ||||| || ||||| Sbjct 856 CGGCACGTTGGCTTTAATCAGGCCGGTGATCACATCCACCGATGGTCGCTGGGTTGCCAG 915 Query 95731 GACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 95790 || || || || || | ||| ||||| || || || | ||| ||| | ||| | Sbjct 916 CACCAGGTGGATACCTGATGCACGCGCTTTTTGTGCCAGGCGCGCAA---TCAGCTCTTC 972 Query 95791 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGAT 95847 |||||||| | | ||||||| |||||||| || ||||||| ||| |||||||| Sbjct 973 CACTTTCTTGCCGACCACCATCATCAGGTCTGCGAGTTCGTCGATCACGACCACGAT 1029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351695388296966