Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_022067.1
Length=109960
Score E
Sequences producing significant alignments: (Bits) Value
seq6643 111 1e-19
>seq6643
Length=1653
Score = 111 bits (122), Expect = 1e-19
Identities = 131/177 (74%), Gaps = 3/177 (2%)
Strand=Plus/Plus
Query 95671 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95730
||||||||||| ||| || ||||| |||| |||||||| || || ||||| || |||||
Sbjct 856 CGGCACGTTGGCTTTAATCAGGCCGGTGATCACATCCACCGATGGTCGCTGGGTTGCCAG 915
Query 95731 GACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 95790
|| || || || || | ||| ||||| || || || | ||| ||| | ||| |
Sbjct 916 CACCAGGTGGATACCTGATGCACGCGCTTTTTGTGCCAGGCGCGCAA---TCAGCTCTTC 972
Query 95791 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGACCACTACCACGAT 95847
|||||||| | | ||||||| |||||||| || ||||||| ||| ||||||||
Sbjct 973 CACTTTCTTGCCGACCACCATCATCAGGTCTGCGAGTTCGTCGATCACGACCACGAT 1029
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 351695388296966
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |