Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_022086.1 Length=50690 Score E Sequences producing significant alignments: (Bits) Value seq7083 86.0 2e-12 >seq7083 Length=1548 Score = 86.0 bits (94), Expect = 2e-12 Identities = 61/70 (87%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 4315 CAGTAGCTCAACTGGAAGAGCAGCGGTCTCCAAAGCCGCGAGTTGGAGGTTCGAGTCCTC 4374 ||||||||||| ||| |||||||||||||||||| |||| ||||| ||||||||||| Sbjct 1284 CAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCCCT 1343 Query 4375 CCTGGCCTGC 4384 |||||| ||| Sbjct 1344 CCTGGCGTGC 1353 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 162063137157264