Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_022970.1 Length=88097 Score E Sequences producing significant alignments: (Bits) Value seq2444 82.4 4e-11 >seq2444 Length=6070 Score = 82.4 bits (90), Expect = 4e-11 Identities = 74/91 (81%), Gaps = 3/91 (3%) Strand=Plus/Minus Query 86216 GGAGGGGTGGCAGAGCGGTTTAATGCACCGGACTGTAAATCCGGCGTCCGACCGGGCATC 86275 ||||||||||| ||| |||| || || ||||||||||||||| || | | | | | Sbjct 185 GGAGGGGTGGCCGAGTGGTTAAAGGCGACGGACTGTAAATCCGTTCTCTCA--GAGTA-C 129 Query 86276 GCTGGTTCAAATCCAGCCCCCTCCACCAAAT 86306 |||||||| |||||||||||||||||||||| Sbjct 128 GCTGGTTCGAATCCAGCCCCCTCCACCAAAT 98 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 281744093509468