Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_023724.1
Length=62991
Score E
Sequences producing significant alignments: (Bits) Value
seq5730 86.0 3e-12
seq7083 82.4 3e-11
>seq5730
Length=1907
Score = 86.0 bits (94), Expect = 3e-12
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Minus
Query 52029 ATGCCCGACGCGCACGTCGGCAAAGGTTCGTCTGTTGGTACCGTCATCCCCACCCGCGGC 52088
|||||||||| |||| | ||||| || | | || || | || ||||| ||||||||
Sbjct 1488 ATGCCCGACGTGCACCTGGGCAAGGGCGCAACCGTGGGCTCGGTGATCCCGACCCGCGGT 1429
Query 52089 GCAGTCATCCCCGCCGCGGTCGGTGTCGACATCGGCTGCGGCATG 52133
|| ||||||| |||||||| || || || |||||||||||||||
Sbjct 1428 GCCATCATCCCGGCCGCGGTTGGCGTGGATATCGGCTGCGGCATG 1384
>seq7083
Length=1548
Score = 82.4 bits (90), Expect = 3e-11
Identities = 51/55 (93%), Gaps = 0/55 (0%)
Strand=Plus/Plus
Query 595 TAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCCGGTTGCAGGTTCGAGTCC 649
|||||||||||| ||||||||||||||||||||||| ||||| |||||||||||
Sbjct 1287 TAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCC 1341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 201416727322992
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |