Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq5177 86.0 7e-12 >seq5177 Length=2144 Score = 86.0 bits (94), Expect = 7e-12 Identities = 91/119 (76%), Gaps = 6/119 (5%) Strand=Plus/Plus Query 43496 CTGGAAGCGATTCGTTTCTATGTCTCGTTTACCTTTACGTTCAACTTTGCCGAACAGGGC 43555 ||||||||||| || ||||| ||| || ||| | ||| |||||||| || || Sbjct 571 CTGGAAGCGATCCGCTTCTACGTCAGCTTCGCCTGCTCATTCGCCTTTGCCG---AGCGC 627 Query 43556 AA---GATGGAAGGTAACGCAAAGATCATGCGTCTGATTGCCCGTGATGAAGCACTTCA 43611 || ||||||||| ||||| |||||||| || |||||||| ||||||||||| || || Sbjct 628 AAGGTGATGGAAGGCAACGCCAAGATCATCCGCCTGATTGCGCGTGATGAAGCCCTGCA 686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569933084349360