Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_025429.1 Length=156446 Score E Sequences producing significant alignments: (Bits) Value seq8929 150 2e-31 >seq8929 Length=1248 Score = 150 bits (166), Expect = 2e-31 Identities = 152/198 (77%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 142252 CAGATGCGTTTCAATCTGGCTCAAGGCTTTCCTCTTCTCTCCACGAAGAAGCTGCATCTG 142311 |||||||| ||| |||| || |||||||| || || |||| ||||||||||||||| Sbjct 906 CAGATGCGCTTCGATCTCACTGCCGGCTTTCCGCTGGTCACCACCAAGAAGCTGCATCTG 965 Query 142312 AAGTCGATCATCGTCGAACTCCTGTGGTTCCTCAAAGGCGATACGAACATCAAGTATCTT 142371 ||||||||| ||| || |||||||| || | |||||||| |||||| |||||| Sbjct 966 CGCTCGATCATCCACGAGCTGCTGTGGTTTCTGCAGGGCGATACCAACATCGGGTATCTG 1025 Query 142372 CACGATCACAACGTCAAGATCTGGGATGAATGGGCTGATGCCAATGGCAACCTCGGACCT 142431 | || || | || |||||||| |||||||| || | ||||||| |||| || || Sbjct 1026 AAAGACAACCAGGTGCGTATCTGGGACGAATGGGCCGACGACAATGGCGACCTTGGCCCG 1085 Query 142432 GTCTACGGCAAGCAGTGG 142449 || ||||||||||||||| Sbjct 1086 GTGTACGGCAAGCAGTGG 1103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500423587083360