Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq6103 102 2e-17 >seq6103 Length=1793 Score = 102 bits (112), Expect = 2e-17 Identities = 149/207 (72%), Gaps = 8/207 (4%) Strand=Plus/Plus Query 233 ACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGCAGC 292 ||||||||||| ||||| || |||||| | | || ||||||||| |||||||| Sbjct 330 ACGATTTCAGTGGTGTAACGGGTCACGCCATCTTTTTC---CCACTTGCGGGTTTGCAGA 386 Query 293 GCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCCAGC 352 |||||||||| | ||| | |||||| |||||| | | ||||| || ||||| Sbjct 387 CGGCCTTCAATGTAGACCGGACGGCCTTTTTTCAGGTATTCACCAGCGATCTCGGCCAG- 445 Query 353 TTTCCGA-AGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGCTT 411 ||| ||| | || || | ||||||||| |||||||| | ||| | |||| ||| Sbjct 446 TTTGCGATAAATCACAATATTGTGCCATTCGGTTTTTTCCTGCTTGACGCCTG---ACTT 502 Query 412 ATCCTTCCAGGTTTCAGACGTGGCAAT 438 || |||||| |||||| ||| ||||| Sbjct 503 GTCTTTCCAGTTTTCAGTCGTCGCAAT 529 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135382166993116