Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020 15-10-27] 12,086 sequences; 74,456,230 total letters Query= NC_025440.1 Length=134369 Score E Sequences producing significant alignments: (Bits) Value seq6608 86.0 5e-12 seq4439 82.4 7e-11 >seq6608 Length=1660 Score = 86.0 bits (94), Expect = 5e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 76501 GTTGTACTGTTTGGCATCGCTCTTCATATCTACCTCATCAGGCAACCAGTAATTTGTAGT 76560 ||||||||| ||||||| |||||| || ||||| || || | |||| | || || | Sbjct 1593 GTTGTACTGGCGCGCATCGCCCTTCATGTCCACCTCGTCGGGGATCCAGAAGTTGGTCGA 1534 Query 76561 TAACTCTTTGTAAGCTCGATAGAAAGATGGATACCGAATATCGTTCCAGTTTACGATACC 76620 | ||| ||||| || |||||||| || || ||| |||| ||||||||||| | ||| || Sbjct 1533 CAGCTCCTTGTACGCCCGATAGAAGGACGGGTACGGAATGTCGTTCCAGTTGAGGATGCC 1474 >seq4439 Length=2591 Score = 82.4 bits (90), Expect = 7e-11 Identities = 84/110 (76%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 75671 TCATCGAACCCATTGTCTAAGTTTGTTTTCTTGTAACTAGAGTTACGCATTTCGAAAAAG 75730 || ||||||||||| || | || || |||||||| | || ||||| ||||| ||| Sbjct 1940 TCGTCGAACCCATTATCCGAATTGGTCTTCTTGTACGACGCATTGCGCATCTCGAAGAAG 1999 Query 75731 TCGGTTTTTGTTTCTGTAAAGTTATCGGCGTAAGCTTTAATCCATGTCAT 75780 ||||| || ||||| || ||||| |||||||| || || ||||| | ||| Sbjct 2000 TCGGTCTTGGTTTCGGTGAAGTTGTCGGCGTAGGCCTTGATCCACGGCAT 2049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429792683017180