Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_026587.1
Length=86246
Score E
Sequences producing significant alignments: (Bits) Value
seq2444 84.2 1e-11
>seq2444
Length=6070
Score = 84.2 bits (92), Expect = 1e-11
Identities = 75/92 (82%), Gaps = 3/92 (3%)
Strand=Plus/Minus
Query 25148 TGGAGGGGTGGCAGAGCGGTTTAATGCACCGGCCTGTAAATCCGGCGTCCGACCGAGCAT 25207
|||||||||||| ||| |||| || || ||| ||||||||||| || | ||| |
Sbjct 186 TGGAGGGGTGGCCGAGTGGTTAAAGGCGACGGACTGTAAATCCGTTCTCTCA--GAGTA- 130
Query 25208 CGCTGGTTCAAATCCAGCCCCCTCCACCAAAT 25239
||||||||| ||||||||||||||||||||||
Sbjct 129 CGCTGGTTCGAATCCAGCCCCCTCCACCAAAT 98
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 275821765985722
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |