Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_027402.1
Length=240413
Score E
Sequences producing significant alignments: (Bits) Value
seq8929 93.3 6e-14
>seq8929
Length=1248
Score = 93.3 bits (102), Expect = 6e-14
Identities = 203/304 (67%), Gaps = 0/304 (0%)
Strand=Plus/Plus
Query 197612 GTGAAACAATATCTTGAGATGATGCAGAACATTCTGGACGAGGGTCATGTTAAAGGCGAT 197671
||||| | ||||| || || ||||| || | ||||| | ||| | || |||
Sbjct 810 GTGAAGCCGTATCTGGATCTGCTGCAGCACGTGCTGGAACACGGTGCCGAAAAGTCCGAC 869
Query 197672 CGTACTGGAACAGGGACGCTTTCTGTCTTTGGACGCCAGATGCGTTTTGATTTGCGTAAA 197731
|| || || || || |||| || || || | |||||||| || ||| | |
Sbjct 870 CGCACCGGTACCGGCACGCGCAGCGTGTTCGGCTGGCAGATGCGCTTCGATCTCACTGCC 929
Query 197732 GGTTTCCCGTTAGTCACGACTAAGAAACTCCACCTGCGTTCTATTATCCATGAACTGCTG 197791
|| || ||| | ||||| || ||||| || || ||||| || || ||||| || ||||||
Sbjct 930 GGCTTTCCGCTGGTCACCACCAAGAAGCTGCATCTGCGCTCGATCATCCACGAGCTGCTG 989
Query 197792 TGGTTCCTTAGTGGGGATACCAACACCAAATATCTGGAAGATAACGGCGTTACCATTTGG 197851
||||| || || |||||||||| | |||||| |||| ||| || || |||
Sbjct 990 TGGTTTCTGCAGGGCGATACCAACATCGGGTATCTGAAAGACAACCAGGTGCGTATCTGG 1049
Query 197852 CGGGAGTGGCAAGATGAAAATGGGAACCTTGGCCCCCTGTATGGTGCACAATGGAGACGT 197911
|| ||| || || ||||| |||||||||| |||| || || ||| | |||
Sbjct 1050 GACGAATGGGCCGACGACAATGGCGACCTTGGCCCGGTGTACGGCAAGCAGTGGCGGCGT 1109
Query 197912 TGGA 197915
||||
Sbjct 1110 TGGA 1113
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 769077394076880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |