Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Hyaloperonospora_20arabidopsidis_20[genbank_20GCA_5F001414525.1_2020
15-10-27] 12,086 sequences; 74,456,230 total letters
Query= NC_028094.1
Length=473558
Score E
Sequences producing significant alignments: (Bits) Value
seq1795 320 5e-82
seq260 199 1e-45
seq75 158 4e-33
seq1167 156 1e-32
seq4369 149 2e-30
seq7203 143 8e-29
seq1324 118 3e-21
seq151 113 1e-19
seq698 95.1 4e-14
seq477 86.0 2e-11
>seq1795
Length=8984
Score = 320 bits (354), Expect = 5e-82
Identities = 1002/1538 (65%), Gaps = 18/1538 (1%)
Strand=Plus/Plus
Query 349205 GGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAA 349264
|| |||||||| || || || || || || || | || ||||| || || || || ||
Sbjct 1208 GGCATCGATTTGGGCACGACGTACTCGTGCGTCGGCGTGTGGCAGAACGACCGCGTGGAG 1267
Query 349265 ATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACT 349324
|| ||||| || || ||||| ||| | || |||||||| || || || ||||| || |
Sbjct 1268 ATTATTGCGAACGACCAAGGAAACCGCACGACGCCATCGTATGTGGCGTTTACGGAGTCA 1327
Query 349325 GAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTT 349384
|||||| ||||||||||| | || || || |||| |||| || || | || |||||
Sbjct 1328 GAGCGTCTGATTGGTGATGCAGCGAAGAACCAAGTTGCTATGAACGCACACAACACGGTG 1387
Query 349385 TTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAATCTGATC 349442
|| ||||| ||||| | || || | | |||||||| || | | || || ||
Sbjct 1388 TTCGATGCCAAGCGTTTGATCGGACGCAAGTTTTCTGATCCAGAAGTGCAG--TCGGACA 1445
Query 349443 TAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTG 349502
| ||||| | || || | || || | | | || ||||| | || ||
Sbjct 1446 TTAAACACTGGCCGTTCAAGGTGACTCGAGATTCGGCGGACAAACCTCAGGTGGAAGTGC 1505
Query 349503 AATATAAAGGTGA-ACAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTT 349561
| | ||||||||| || |||| || || || || || || || ||||| | |
Sbjct 1506 AGTTTAAAGGTGAGACCAAAAGG-TTCCAGCCTGAGGAGATCTCGTCCATGGTGCTGATC 1564
Query 349562 AAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACT 349621
|| ||| || ||||| ||||| ||| | || | ||| | |||| || | ||
Sbjct 1565 AAGATGCGTGAGATTGCGGAAGCTTATATTGGCAAGCAAGTGAGGAATGCAGTGGTGACG 1624
Query 349622 GTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCG 349681
|| || || || || || || | || ||| || || ||||||||||| ||||||
Sbjct 1625 GTCCCTGCATACTTCAACGACTCGCAACGTCAGGCGACCAAAGATGCTGGAGCCATTGCT 1684
Query 349682 GGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTT 349741
|| || || || || | || || || || || || ||||| || || || || || ||
Sbjct 1685 GGTTTGAACGTGCTGCGTATTATCAACGAGCCAACGGCTGCCGCGATCGCCTACGGCCTG 1744
Query 349742 GATAAAATGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTT 349801
|| || | | | | | ||| | ||| | || || || ||| | || || || || |||
Sbjct 1745 GACAAGAAGGGCGGC---GAACACAATGTGCTAATCTTCGATCTGGGCGGCGGCACGTTT 1801
Query 349802 GATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGAT 349861
|| || || || | | |||| || || || ||||| || ||||| ||||| |||||
Sbjct 1802 GACGTGTCGCTGTTGAGCATTGAGGACGGCATCTTTGAGGTGAAAGCCACTGCCGGTGAC 1861
Query 349862 ACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTT 349921
|| ||| | || || ||||| ||||| || || || || |||||||| || ||
Sbjct 1862 ACGCATTTGGGCGGTGAAGACTTTGACAACCGCCTTGTGGATCATTTTGTCTCCGAGTTC 1921
Query 349922 AAGCGTCAAGC-TAAAATTGATATTGGAGATAATCCTA-GAGCAATGCGTCGCCTAAGAA 349979
|||||| |||| | | |||| || | | | || | | || ||||||| || | |
Sbjct 1922 AAGCGT-AAGCATCGCAAAGATA-TGACGTTGAACCAACGTGCCCTGCGTCGACTGCGTA 1979
Query 349980 CTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTG 350039
| || || || || || ||||| |||| || || || | ||| | | ||||| ||||
Sbjct 1980 CGGCATGCGAGCGAGCCAAGCGGACCTTGTCCACTTCTGCGCAAGCGTACATTGAGATTG 2039
Query 350040 ATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAAT 350099
|||| ||| ||| |||| |||||| | | ||||| || || | ||||| ||
Sbjct 2040 ATTCGCTTCTTGACGGCATCGATTTCAACACGACCATTACGCGAGCGAGATTTGAGGATC 2099
Query 350100 TATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGATGCAA 350159
|||| ||| | ||| | |||||||| || || | |||| || || | |
Sbjct 2100 TATGCGCCGATTTCTTTCGCAAGACAATGGAGCCAGTCGCCCAAGTTTTGCGCGACTCGA 2159
Query 350160 AAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAA 350219
| |||| ||| | | |||| | || | || ||||| || || || || ||||
Sbjct 2160 AGCTGTCGAAAGGCGAAGTGCATGAGATCGTCCTGGTCGGTGGCTCCACTCGCATCCCAA 2219
Query 350220 AAGTTCAACAGTTACT-ATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAAT 350278
| || |||||||| || ||| || || ||||| || || ||| | || || ||||||
Sbjct 2220 AGGTGCAACAGTTGCTGATC-GATTTCTTTAACGGAAAGGAATTATTTAAGTCGATTAAT 2278
Query 350279 CCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAG 350338
|| || |||||||| || ||||| || | || || || | ||| | ||| | |
Sbjct 2279 CCGGACGAAGCTGTGGCGTATGGAGCGACCGTCCAAGCTGCAATTCTGAGTGGCGGTGGG 2338
Query 350339 ---AGTTCTAAAATTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTA 350395
||| || | | ||||| | || | |||||| | || | |||||||||||
Sbjct 2339 GCCTCTTCCAAGCTGCAGGATCTTCTGCTGTTGGATGTAGCACCTTTGTCGCTTGGATTG 2398
Query 350396 GAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAA 350455
|| || | || | ||| ||||| || ||||| | || | ||| || ||| ||||
Sbjct 2399 GAGACGGCAGGCGGAGTCATGACCAAGCTCATTCCACGCAACACTACGGTCCCTGCAAAG 2458
Query 350456 AAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTT 350515
||||| || | || || || | ||| ||||||||||| | ||| || || || |||
Sbjct 2459 AAGTCGCAGTCATTCTCGACGTATGCCGATAATCAGCCTGGTGTACTGATCCAGGTGTTT 2518
Query 350516 GAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAA 350575
|||||||| || || || ||||| || || || | |||| | | |
Sbjct 2519 GAAGGTGAGCGGGCGATGACACGCGATAACCATCTTCTAGGCAAGTTTAGCTTGGACGGC 2578
Query 350576 ATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAAT 350635
||||| || ||||| | || || ||||||||||| ||| | || || | ||| |||
Sbjct 2579 ATTCCGCCTATGCCGCGTGGTGTGCCTCAGATTGACGTCACATTTGACGTGGATGTGAAT 2638
Query 350636 GGTATTTTAAATGTTACCGCAGTTGAAAAATCAAGTGGTAAAAGTAGTAAGGTAGAAATT 350695
|| ||| |||| || | || || || || || | || ||| | ||| | |||
Sbjct 2639 GGCATTCTAAACGTGTCAGCCGTCGAGAAGTCGACGGGGAAAGAGAACAAGATCACGATT 2698
Query 350696 ACTAATGATAAATCTAGACTTTCAAAAGAAGATATTGA 350733
|| ||||||||| | | || ||| | | || |||||
Sbjct 2699 ACAAATGATAAAGGTCGGCTATCACAGGCCGAGATTGA 2736
Score = 158 bits (174), Expect = 4e-33
Identities = 570/879 (65%), Gaps = 11/879 (1%)
Strand=Plus/Minus
Query 182919 ACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGT 182978
|| |||| ||| ||||| || || ||||||| || |||||||| || ||||| ||
Sbjct 2652 ACGTTTAGAATGCCATTCACATCCACGTCAAATGTGACGTCAATCTGAGGCACACCACGC 2593
Query 182979 GGCATTGGTGGAATTCCAGTTAAAG-TAAATTCACCTAATTTATTATTATCTTTAGTTCT 183037
||||| || ||||| || || ||| |||| | |||| || ||||| || |
Sbjct 2592 GGCATAGGCGGAATGCC-GTCCAAGCTAAACTTGCCTAGAAGATGGTTATCGCGTGTCAT 2534
Query 183038 TGCTCTCTCGCCTTCATATACTTGAAT-AGTAACTGCTGGCTGATTATCACTATAAGTAG 183096
|| | ||| |||||| | || || || |||| | | ||||||||||| ||| || |
Sbjct 2533 CGCCCGCTCACCTTCAAACACCTGGATCAGTA-CACCAGGCTGATTATCGGCATACGTCG 2475
Query 183097 AAAAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAGTCATTA 183156
| || ||| || || ||| | || | || || |||| | ||||| |
Sbjct 2474 AGAATGACTGCGACTTCTTTGCAGGGACCGTAGTGTTGCGTGGAATGAGCTTGGTCATGA 2415
Query 183157 CTTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATC-T 183215
|| | | || || || ||||| | || || ||||||||||| | | | | ||| |
Sbjct 2414 CTCCGCCTGCCGTCTCCAATCCAAGCGACAAAGGTGCTACATCCAACAGCAGAAGATCCT 2355
Query 183216 GATGTTTT--ATCTGATTTAATATCACTTAAAATTGCAGCTTGAACAGCTGCACCATATG 183273
| | || | | | |||| | |||||||||||| || | || ||||| |
Sbjct 2354 GCAGCTTGGAAGAGGCCCCACCGCCACTCAGAATTGCAGCTTGGACGGTCGCTCCATACG 2295
Query 183274 CAACAGCTTCATCTGGGTTAATTGAACGAGATAATTCTTTGCCATTAAAAAATTCTGAAA 183333
| |||||||| || || ||||| || | ||||||| || || ||||| || || |
Sbjct 2294 CCACAGCTTCGTCCGGATTAATCGACTTAAATAATTCCTTTCCGTTAAAGAAATCGATCA 2235
Query 183334 GCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATCGATAT 183393
||| ||||| | ||||| || | ||| || |||||||| | || | |||| | |
Sbjct 2234 GCAACTGTTGCACCTTTGGGATGCGAGTGGAGCCACCGACCAGGACGATCTCATGCACTT 2175
Query 183394 TACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTTTTTCTAA 183453
| ||| | | || || ||||||| | || || ||||| || || | ||
Sbjct 2174 CGCCTTTCGACAGCTTCGAGTCGCGCAAAACTTGGGCGACTGGCTCCATTGTCTTGCGAA 2115
Query 183454 ATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaGTCAATAC 183513
| ||||| |||| || || ||||| |||| || | | | || || || |
Sbjct 2114 AGAAATCGGCGCATAGATCCTCAAATCTCGCTCGCGTAATGGTCGTGTTGAAATCGATGC 2055
Query 183514 CATTATATAAG-GAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTTCTTTTA 183572
| | | | ||| |||||||| ||||| | | ||| | ||| | || || || | ||
Sbjct 2054 CGTCA-AGAAGCGAATCAATCTCAATGTACGCTTGCGCAGAAGTGGACAAGGTCCGCTTG 1996
Query 183573 GCTCGTTCACATGCTGTTCTTAGTCGACGTAATG-ATCTTGGATTATCTGTAATATCTTG 183631
||||| || ||||| || | |||||||| | | | |||| | | | || |||||||
Sbjct 1995 GCTCGCTCGCATGCCGTACGCAGTCGACGCAGGGCACGTTGGTTCAAC-GTCATATCTTT 1937
Query 183632 TTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAATCTTGTATCAAAATCTTC 183691
||| || | || || || | | |||||| | | | | | ||||| |||||
Sbjct 1936 GCGATGCTTACGCTTGAACTCGGAGACAAAATGATCCACAAGGCGGTTGTCAAAGTCTTC 1877
Query 183692 ACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTTCAATATT 183751
||| || ||||| || || || ||||| ||||| || ||||| || ||||| ||||| |
Sbjct 1876 ACCGCCCAAATGCGTGTCACCGGCAGTGGCTTTCACCTCAAAGATGCCGTCCTCAATGCT 1817
Query 183752 TAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790
|| | || || ||||| || || || |||| ||| ||
Sbjct 1816 CAACAGCGACACGTCAAACGTGCCGCCGCCCAGATCGAA 1778
>seq260
Length=43799
Score = 199 bits (220), Expect = 1e-45
Identities = 931/1462 (64%), Gaps = 22/1462 (2%)
Strand=Plus/Plus
Query 349217 GGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTGTAGAAATAATTGCAAAT 349276
|| || || || || || || | || ||||| || || || || || || ||||| ||
Sbjct 2920 GGCACGACGTACTCGTGCGTCGGCGTGTGGCAGAACGACCGCGTGGAGATCATTGCGAAC 2979
Query 349277 GATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCGAAACTGAGCGTATGATT 349336
|| || |||||| | || ||||| || ||||| || || || || || |||||| ||||
Sbjct 2980 GACCAGGGTAACCGCACGACGCCGTCGTACGTGGCGTTCACGGACACGGAGCGTCTGATC 3039
Query 349337 GGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATACGGTTTTTGATGCTAAG 349396
||||| | || || || || | || || | | |||||||| ||||| || |||
Sbjct 3040 GGTGACGCGGCGAAGAACCAGGTGGCGATGAACGCGCACAATACGGTGTTTGACGCGAAG 3099
Query 349397 CGACTTATTGGTAGAAGTTTTTCTGACAAATCTACACAATCTGATCTAAAACATTTTCCT 349456
|| || |||||| | | || || ||| || | || | || || | ||
Sbjct 3100 CGCCTCATTGGTCGCAAGTTCTCGGACGCGGTGGTGCAGGCGGACGTGAAGCACTGGCCG 3159
Query 349457 TTTA--CTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGAGGTTGAATATAAAGGTG 349514
|| | ||| || | | || || || || || ||| | | || || |
Sbjct 3160 TTCAAGCTGACGT--CGGGTGCTGGCGACAAGCCGCAGATCACGGTGCAGTTCAAGGGCG 3217
Query 349515 AA-CAAAAACAATTTTTACCCGAAGAAATTTCATCAATGGTTTTAGTTAAAATGAAGGAA 349573
| | || || ||| ||||| || ||||| || ||||| | | || ||| |||
Sbjct 3218 AGTCGAAGACG-TTTCAGCCCGAGGAGATTTCGTCCATGGTGCTCATCAAGATGCGCGAA 3276
Query 349574 ATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTTATTACTGTACCAGCCTAT 349633
| || || || | | | || | ||| | | || || || || || || |||||
Sbjct 3277 GTGGCCGAGGCGTTTATCGGCAAGGAAGTGAAGAACGCGGTGATCACGGTGCCGGCCTAC 3336
Query 349634 TTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGCATTGCGGGGTTAAATGTT 349693
||||| || | ||||| || || || ||||| || |||||| || | || ||
Sbjct 3337 TTTAACGACTCGCAGCGGCAGGCGACGAAGGATGCAGGGGCCATTGCTGGACTCAACGTG 3396
Query 349694 CTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATATGGGCTTGATAAAATGAGT 349753
|| | || ||||| || || || ||||| || || || || || || || || | | |
Sbjct 3397 CTCCGTATCATTAACGAGCCGACGGCTGCGGCCATCGCCTACGGTCTGGACAAGAAGGGC 3456
Query 349754 GACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTA 349813
| | || ||| | || || ||||| | ||||| || ||||| || || || ||
Sbjct 3457 GGC---GAGCGCAATGTGCTCATCTTTGACCTGGGTGGCGGCACTTTCGACGTGTCGCTG 3513
Query 349814 CTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGT 349873
|| | |||| || || || ||||| || || || ||||| || || || ||| | ||
Sbjct 3514 CTGAGCATTGAGGACGGCATCTTTGAGGTGAAGGCGACTGCAGGGGACACGCATTTGGGC 3573
Query 349874 GGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAGCT 349933
||||| || ||||| || || ||||| || || | || ||||| || |||||
Sbjct 3574 GGAGAGGACTTTGACAACCGCCTCGTGGACCACTTCACGCAGGAGTTTAAACG-CAAGCA 3632
Query 349934 AAA-ATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACG 349992
| || || || || | | || | ||||| || | || |||||||| ||
Sbjct 3633 CCGCAAGGACATCACGGAGAACCAGCGCGCGCTCCGTCGTCTGCGCACGGCGTGTGAGCG 3692
Query 349993 TGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGA 350052
||| ||||| | | || || | | || | | ||||| ||||| ||||| ||
Sbjct 3693 TGCGAAGCGGACGCTGTCGTCGTCGGCACAGGCGTACATTGAGATTGACTCTCTGTTCGA 3752
Query 350053 TGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCT 350112
||||| || ||| || | || || || || || || || || | || || ||
Sbjct 3753 TGGCATCGACTTCAACTCGACCATCACGCGCGCACGTTTCGAGGACATGTGCGGCGA-CT 3811
Query 350113 TTTTAGAGCAACA--ATGGATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAA 350170
||| |||| | ||||| || ||||| || || | || || || |||| ||
Sbjct 3812 ATTTCC-GCAAGACGATGGAGCCGGTGGAGAAGGTGCTGCGTGACGCCAAGCTGTCGAAG 3870
Query 350171 AATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAG 350230
| |||| | |||| || || | || || ||||| || ||||| || || || || |||
Sbjct 3871 AGTCAGGTGCATGAGGTGGTGCTCGTGGGCGGTTCGACGCGTATCCCGAAGGTGCAGCAG 3930
Query 350231 TTACTATCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCT 350290
| | || || ||||| || ||||| || || | || ||||| || || || |||
Sbjct 3931 CTGTTGTCGGACTTTTTCAACGGCAAGGAGCCCAACAAGTCGATTAACCCGGACGAGGCT 3990
Query 350291 GTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGGAAATAAGAGTTCTAAAAT- 350349
|| || || ||||| |||| ||||| ||||||| ||| ||| | || | |
Sbjct 3991 GTCGCGTACGGTGCGACTGTCCAGGCTGCTATTTTGAGTGGCAATGACTCGTCGGAGAAG 4050
Query 350350 -TG-ATGATCTATTACTACTAGATGTAACTCCACTTTCGCTTGGATTAGAAACTTCTGGT 350407
|| | || || |||| || || || || || ||||||||||| | || || | ||
Sbjct 4051 CTGCAGGACCTGCTACTGCTGGACGTGACGCCGCTTTCGCTTGGTCTGGAGACGGCCGGC 4110
Query 350408 GAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACCTACAAAAAAGTCCCAAACT 350467
| || ||||| || ||| | | || | || || || || || ||||| || ||
Sbjct 4111 GGTGTGATGACGACGCTGATTGCGCGCAACACGACGGTGCCGACGAAGAAGTCGCAGACG 4170
Query 350468 TTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCAAGTATTTGAAGGTGAACGT 350527
||||| || | ||| || || ||||| | || ||||| || |||||||| || |
Sbjct 4171 TTTTCAACGTATGCGGACAACCAGCCGGGCGTGCTGATTCAGGTGTTTGAAGGCGA--GC 4228
Query 350528 GCTCG--CACTAAAGATAATAATAAACTTGGAGAATTTACCCTAAGTGAAATTCCACCAA 350585
||||| || || || || ||||| | || | | || || || || |
Sbjct 4229 GCTCGATGACGCGCGACAACAACCTGCTTGGCAAGTTCAATTTGGATGGCATCCCGCCCA 4288
Query 350586 TGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGATTCAAATGGTATTTTAA 350645
||||| | || || |||||||| || || | ||||| |||||| | || |||||| |||
Sbjct 4289 TGCCTCGCGGCGTGCCTCAGATCGACGTGACGTTCGACATTGATGCGAACGGTATTCTAA 4348
Query 350646 ATGTTACCGCAGTTGAAAAATC 350667
| || | || || || || ||
Sbjct 4349 ACGTGTCGGCCGTGGAGAAGTC 4370
>seq75
Length=61118
Score = 158 bits (174), Expect = 4e-33
Identities = 211/291 (73%), Gaps = 2/291 (1%)
Strand=Plus/Plus
Query 206458 TATCGAGCTGTTTTATTAAATACGCCTAGCATAGGAATAATACCATTAGAAGTTCCATTT 206517
||||| || || | |||||| |||| ||||| || ||||| || || |||| |||||
Sbjct 21855 TATCGTGCCGTGTCATTAAACACGCGAAGCATGGGGATAATCCCGTTCGAAGAGCCATTA 21914
Query 206518 GTTCCTCTAATATGACTGCCAGTCCCTCTAATATTATGTATATGTAAT-CCAATTCCTCC 206576
|| |||| ||| | || || | | ||||| || ||| |||| ||||| |||||
Sbjct 21915 GTGCCTCGAATGTAGCTATTCGTGGCCCGGATATTGTGCATAC-TAATGCCAATCCCTCC 21973
Query 206577 TGCCCATTTTGAAATATTAGCACATTCTTTTAATGTATTATAAATTCCATCAACACTATC 206636
||||||||| ||||| ||||||| ||| || |||| ||| ||||| |||| |||
Sbjct 21974 TGCCCATTTCGAAATGCACGCACATTGTTTCAAGGTATCATAGATTCCTTCAATGGAATC 22033
Query 206637 ACTTTCCATAGCAATTAAAAAACAAGAACTTAATTGTGGTCGTGGCGTTCCAGCATTAAA 206696
| || |||||| | |||||| || ||| ||||| || || || || || ||||||||
Sbjct 22034 ATCTTTCATAGCCAATAAAAAGCACGAAGACAATTGGGGGCGAGGGGTACCGGCATTAAA 22093
Query 206697 TAAAGTAGGAGTAGCATGTGTAAAATATTTTTGAGACATTAAATTATAAGT 206747
| || || || ||||| |||||| | || || |||||||| | ||| ||
Sbjct 22094 CAGCGTCGGGGTCGCATGGGTAAAAAACTTCTGCGACATTAATTCATATGT 22144
>seq1167
Length=14859
Score = 156 bits (172), Expect = 1e-32
Identities = 170/226 (75%), Gaps = 0/226 (0%)
Strand=Plus/Minus
Query 130729 CAGCTAACATTCCTCCAAGCATAACAAAATCAGCTCCTGCTCCAAATGCTTTCGCAATAT 130788
|||| | ||| || || ||||| ||||||||||| || |||||||| ||||| || | |
Sbjct 7990 CAGCAAGCATGCCACCTAGCATGACAAAATCAGCCCCAGCTCCAAAAGCTTTGGCCACGT 7931
Query 130789 CCCCGGGAGATTTACAACCCCCATCAGCAATAACATGTCCATTTAATCCATGTGCCGCAT 130848
|||| ||| | |||| || ||||||||||| || || || || | ||| || || ||||
Sbjct 7930 CCCCTGGACACGTACAGCCTCCATCAGCAATCACGTGACCCTTGAGTCCGTGAGCAGCAT 7871
Query 130849 CAGCACACTCTGAAATAGCAGAAAGTTGTGGATATCCAACTCCAGTTACTTTTCTTGTAG 130908
|||||||||| | |||||| || || || || || || || ||| ||| | || |
Sbjct 7870 CAGCACACTCGAGCACAGCAGACAGCTGCGGGTACCCCACCCCCGTTTGTTTCCGGGTCG 7811
Query 130909 TACAAACAGCACCTGGACCAATACCAATTTTAACAATATCAGCTCC 130954
|||| || | ||| ||||| || || | ||||| ||||||||||||
Sbjct 7810 TACACACTGAACCAGGACCGATGCCGACTTTAATAATATCAGCTCC 7765
>seq4369
Length=2652
Score = 149 bits (164), Expect = 2e-30
Identities = 391/591 (66%), Gaps = 12/591 (2%)
Strand=Plus/Minus
Query 223700 ACAGCAAATTCTGTATGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAAT 223759
|| ||||| || ||||| | || || | || || |||||||| || || || ||
Sbjct 2620 ACTGCAAAATCACAATGTACGCCTTCGTCACGAGAAATCAATTCATTAGAGAAAGTCAAA 2561
Query 223760 CCAGGCATTAAACCTCTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaT 223819
|| ||||||||||| | ||||||| |||| | || | || ||||| ||||| || |||
Sbjct 2560 CCTGGCATTAAACCACGTTTTTTCAACCAATAAATAGAACAGAAAGCACCTGAGAAGAAT 2501
Query 223820 ATACCTTCTACA--CAAGCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTC 223877
|| || || || || | || || | | || ||||| || | | | ||
Sbjct 2500 ATCCCCTCCACCGCCATG--AAGGCAATGAGACGCTCAGCAAA---TGTACCCT---CTT 2449
Query 223878 CTATCCATTTTAATGCCCAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCAT 223937
||||||| || | |||||| | |||||| ||| ||| | || | | |||| || |
Sbjct 2448 CTATCCACTTCAGTGCCCATTTTGCTTTCTTCCCAATGGTGGGAATAGTATCTACAGATT 2389
Query 223938 TAAACAACTTCGATTTCTCATTATGATCACTTATATATGTTTCTATTAATTGACTATACA 223997
||| ||||| | || || |||| | |||||||| || || || || ||
Sbjct 2388 GAAATAACTTGGCCTTTTCTACCGCATCATTAATATATGTATCAATCAAGAGAGAGTAAG 2329
Query 223998 TTATTGAATGTATATTTTCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTA 224057
| | |||||| |||||||| || ||||||||||| | |||||| | |
Sbjct 2328 TCTCAGCATGTATGTTTTCCATCATGATCTGAAATCCATAGAGACAACGTGCCTCCGGCA 2269
Query 224058 TTTGTACTTCTGTCATAAATCTTAATCCTAAATTCTCTAATACTATACCATCACTTGCCG 224117
|| || ||| ||||||| | | ||| ||||| |||||| ||||| ||||
Sbjct 2268 CCTGCACCTCTTTCATAAAATTCACAGCTAGGTTCTCATTTACTATCCCATCCGCAGCCG 2209
Query 224118 CAAAAAATGCCAATATCATAGAAATAAAATATCTTTCATCATTGGTTAATGATAACCAGT 224177
|||| || ||||| || ||||| |||| ||||||||||| ||| | ||| |
Sbjct 2208 CAAAGAACGCCAAAATATGCGAAATGAAATGTCTTTCATCATCATTTAGCCTTTTCCAAT 2149
Query 224178 GCGATAAATCTTTTGATAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTT 224237
|| || || | || ||||||| ||||| || ||||||| | |||| |||||||
Sbjct 2148 CCGCAAAGTCATCGGACAAATCAATTTCTTCAGCAGTCCAAAAGGACGCTTCAGCTTTTT 2089
Query 224238 TATACATTTCCCATATATCTTGGT-CTTGTATCGGAAACATTACAAAGCGA 224287
|||||| | ||||||||| | | |||| || ||| | | ||||| |||
Sbjct 2088 TATACAACTGCCATATATCATCATGCTTG-ATGGGATATAGGACAAACCGA 2039
Score = 93.3 bits (102), Expect = 1e-13
Identities = 89/114 (78%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 399461 CTCCGGTGCATTTTGTTCTATTTATTGGTTaaaaaaaCGTTCATTAATGCCAGGACTTAC 399520
||| ||||| || ||||||||||||||||| ||||||||| ||||||||||| | ||
Sbjct 2507 CTCAGGTGCTTTCTGTTCTATTTATTGGTTGAAAAAACGTGGTTTAATGCCAGGTTTGAC 2566
Query 399521 TTTTTCAAATGAATTAATATCACGCGATGAAGCTCTTCATACTGAATTTGCTGT 399574
||| || |||||||| || || || || |||| | ||| ||| ||||| ||
Sbjct 2567 TTTCTCTAATGAATTGATTTCTCGTGACGAAGGCGTACATTGTGATTTTGCAGT 2620
>seq7203
Length=1522
Score = 143 bits (158), Expect = 8e-29
Identities = 361/543 (66%), Gaps = 8/543 (1%)
Strand=Plus/Plus
Query 223715 TGTAATGCCTCATCTCTTGATATTAATTCATTTGAAAATGTTAATCCAGGCATTAAACCT 223774
||||| | ||||| | || ||||| ||||| || ||||| | || |||||||||||
Sbjct 983 TGTAAGCCTTCATCACGAGAAATTAACTCATTAGAGAATGTAAGACCCGGCATTAAACCA 1042
Query 223775 CTCTTTTTCATCCAAAATATTGCGCAAAAAGCTCCTGaaaaaaaTATACCTTCTACACAA 223834
| ||||||| ||| ||||| | ||| || | ||||| || || ||||||||||||
Sbjct 1043 CGTTTTTTCAACCAGAATATCGAGCAGAATGAGCCTGAGAAGAAAATACCTTCTACAACG 1102
Query 223835 GCAAACGCTACTAATCGTGTTGCAAAATTTGAATCTTTGTCTCCTATCCATTTTAATGCC 223894
||||| |||| | || || ||| | | | | || | ||||| || |||
Sbjct 1103 GCAAATGCTAACAGGCG-GT--CAA---TAAAGTTTCCGTTATCAATCCAACGCAAAGCC 1156
Query 223895 CAATCTGCTTTTTTCTTAATACAAGAAAAATTTTCTAAAGCATTAAACAACTTCGATTTC 223954
||||| ||||||||||| | ||| | || || |||| ||||||| || || | |
Sbjct 1157 CAATCGGCTTTTTTCTTTACACACGGAATATGGTCTATGGCATTAAGCATTTTATCTCGC 1216
Query 223955 TCATTATGATCACTTATATATGTTTCTATTAATTGACTATACATTATTGAATGTATATTT 224014
||| | | || | ||||| | || || | | || || |||||| || |||
Sbjct 1217 TCAACAGGGTCTTTGATATAAGAATCAATCAGAAGCGAGTAAGTTTCTGAATGAATGTTT 1276
Query 224015 TCCATTGCTATTTGAAATCCATAAAATGCTTTTGCCTCTGCTATTTGTACTTCTGTCATA 224074
||||| || || || ||||| || |||||| || || | |||||| | |||
Sbjct 1277 TCCATCATAATCTGGAAACCATAGAAACATTTTGCTTCGGCAAATTGTACACGAGAGATA 1336
Query 224075 AATCTTAATCCTAAATTCTCTAATACTATACCATCACTTGCCGCAAAAAATGCCAATATC 224134
|| | | | | || || || || ||||||||| || |||||||| ||||||| |
Sbjct 1337 AAATTGACTGCCAAGTTTTCATTAACGATACCATCAGAAGCAGCAAAAAACGCCAATA-C 1395
Query 224135 AT-AGAAATAAAATATCTTTCATCATTGGTTAATGATAACCAGTGCGATAAATCTTTTGA 224193
|| ||||||||||| | ||| ||| | | | | ||||| ||||| |||
Sbjct 1396 ATGAGAAATAAAATGACGCTCACCATCGCTCAGGCTTTCCCAGTCTTTCAAATCCGGTGA 1455
Query 224194 TAAATCAACTTCTTGTGCTCTCCAAAAACAATCTTCTGCTTTTTTATACATTTCCCATAT 224253
|| || | ||||| ||| |||| || || | || ||||||||| | || ||| ||
Sbjct 1456 TAGGTCTATTTCTTCGGCTGTCCAGAATGAAGCCTCATGTTTTTTATAAAATTGCCAGAT 1515
Query 224254 ATC 224256
|||
Sbjct 1516 ATC 1518
Score = 132 bits (146), Expect = 1e-25
Identities = 273/404 (68%), Gaps = 7/404 (2%)
Strand=Plus/Minus
Query 399461 CTCCGGTGCATTTTGTTCTATTTATTGGTTaaaaaaaCGTTCATTAATGCCAGGACTTAC 399520
||| || |||| || || || | ||||| ||||||||| |||||||| || |||||
Sbjct 1081 CTCAGGCTCATTCTGCTCGATATTCTGGTTGAAAAAACGTGGTTTAATGCCGGGTCTTAC 1022
Query 399521 TTTTTCAAATGAATTAATATCACGCGATGAAGCTCTTCATACTGAATTTGC-TGTATTAT 399579
|| || ||||| ||||| || || ||||||| | || ||| ||||| ||| || |
Sbjct 1021 ATTCTCTAATGAGTTAATTTCTCGTGATGAAGGCTTACACCGTGACTTTGCCTGT-TTGT 963
Query 399580 TATATAATAA--ACTTGANNNNNNNNNNNNNNNNTCACGAATTATGGAAATTATT-AAAG 399636
|||||| ||| || | ||| || | | | ||| | ||||
Sbjct 962 TATATACTAATTACATTCAGAACAAGTATGACCCTCAGAAAATCTACGATTTAGTGAAAG 903
Query 399637 AAGCAGTTGAAATTGAAAAAGAATTTATATGTGATGCTCTTCCTTGTAGATTAATTGGAA 399696
| ||||| ||||| ||||||||||| || |||||| || ||| | || ||||| |
Sbjct 902 ATGCAGTAGAAATCGAAAAAGAATTCGTAACTGATGCGCTACCTGTTTCGTTGATTGGCA 843
Query 399697 TGAATTCAACATTAATAACACAATATATTGAGTTTATTGCTGAT-AGATTAAGTTTACAA 399755
||||| | | |||| ||||| ||||||||| | || ||| | || | ||
Sbjct 842 TGAATGCCGAACTAATGTGCCAATACATTGAGTTTGTGGCCGATCACCTTTTGGAATCAT 783
Query 399756 TTAGATTGTGATAAAATTTATAATGTTACAAATCCATTTGATTGGATGGAAATGATTAGT 399815
| || | | ||||||||||||||| || ||||| || |||| ||||| ||||||
Sbjct 782 TAGGAGT-TAATAAAATTTATAATGCGACCAATCCTTTCGATTTCATGGATATGATTTCG 724
Query 399816 CTTGAAGGTAAAACTAAtttttttGAAAAAAGAGTTGGCGAATA 399859
| |||| ||||| ||||| || |||||| | || || |||||
Sbjct 723 TTACAAGGCAAAACCAATTTCTTCGAAAAACGTGTAGGTGAATA 680
Score = 98.7 bits (108), Expect = 3e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 223415 TACTCACCTACTCTTCTTTCaaaaaaaTTTGTTTTTCCTTCTATACTTATCATTTCCATA 223474
|| |||||||| | | |||| || ||||| ||||| |||| || ||||| |||||
Sbjct 680 TATTCACCTACACGTTTTTCGAAGAAATTGGTTTTGCCTTGTAACGAAATCATATCCATG 739
Query 223475 AAATCAAACGGATTACTAGAATTATAAATTTTATTATTTCCTAATTGAACTGCTAATCT- 223533
||||| || ||||| | | |||||||||||||||| |||||| ||| || |
Sbjct 740 AAATCGAAAGGATTGGTCGCATTATAAATTTTATTAACTCCTAA-TGATTCCAAAAGGTG 798
Query 223534 ATCTGCTACAAATTCTATATATTGTGACATTAATTTACTATTCATACCTATTAAATTACA 223593
||| || ||||| || || ||||| |||||| || |||||| || || || |
Sbjct 799 ATCGGCCACAAACTCAATGTATTGGCACATTAGTTCGGCATTCATGCCAATCAACGAAAC 858
Query 223594 CGGCAATGCTTCACAGATAAACTCTTTTTCTATTTCTACCGCAttttt 223641
|| | || ||| | || |||||||| |||||||| |||| |||
Sbjct 859 AGGTAGCGCATCAGTTACGAATTCTTTTTCGATTTCTACTGCATCTTT 906
>seq1324
Length=13147
Score = 118 bits (130), Expect = 3e-21
Identities = 139/188 (74%), Gaps = 0/188 (0%)
Strand=Plus/Plus
Query 140550 TTTTGAATATTATAATCAGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATT 140609
||||| || || || || || | || || || ||||| ||||| || || ||||||||
Sbjct 2106 TTTTGGATGTTGTAGTCCGAGAGCGTGCGACCGTCTTCCAGTTGCTTGCCGGCAAAGATC 2165
Query 140610 AGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCA 140669
||||| ||||| ||||||||||| ||||| ||||||||||| || || ||||| |||
Sbjct 2166 AGACGCTGCTGGTCAGGAGGAATGCCTTCCTTATCCTGAATCTTCTGCTTCACATTGTCA 2225
Query 140670 ATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAA 140729
|| || || || || || || || || | ||||| || || | || || |||||
Sbjct 2226 ATGCTGTCGGACGGCTCCACGTCCAGCGTGATCGTCTTGCCTGTCAACGTCTTCACAAAG 2285
Query 140730 ATCTGCAT 140737
||||||||
Sbjct 2286 ATCTGCAT 2293
>seq151
Length=51439
Score = 113 bits (124), Expect = 1e-19
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585
|| || || || || || ||||| || || || || || ||| | || || || |||
Sbjct 38061 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCACTCAGCGTACGGCCGTCT 38120
Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645
|| || || || || |||||||| || || ||||| ||||| || || || || || |||
Sbjct 38121 TCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCAGGCGGGATGCCCTCCTTGTCC 38180
Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705
|| || || || ||||| |||||||| ||||| || || || || || |||| |||
Sbjct 38181 TGGATCTTCTGCTTCACATTGTCAATCGAGTCAGACGGCTCCACGTCCAGCGTAATCGTC 38240
Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || | || || || |||||||||||
Sbjct 38241 TTCCCTGTCAACGTCTTCACGAAAATCTGCAT 38272
Score = 105 bits (116), Expect = 2e-17
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 140507 CATACCACCACGTAATCTTAGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATC 140566
||| ||||| || | | || || || || || || ||||| || || || || || ||
Sbjct 38270 CATGCCACCGCGCAGGCGAAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTC 38329
Query 140567 AGATAATGTTCGCCCATCTTCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGG 140626
| || || || ||||| || || || || |||||||| || || ||||| |||||
Sbjct 38330 GCTCAGCGTGCGGCCGTCTTCCAGCTGCTTGCCGGCAAAGATCAGCCGCTGCTGGTCAGG 38389
Query 140627 AGGAATTCCTTCTTTATCCTGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTC 140686
|| || || || || ||||| || || || ||||| |||||||| ||||| || ||
Sbjct 38390 CGGGATGCCCTCCTTGTCCTGGATCTTCTGCTTCACATTGTCAATCGAGTCAGACGGCTC 38449
Query 140687 AACTTCAAGTGTAACTGTCTTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737
|| || || || | ||||| || || | || || || |||||||||||
Sbjct 38450 CACGTCCAGCGTGATCGTCTTCCCTGTCAACGTCTTCACGAAAATCTGCAT 38500
>seq698
Length=23939
Score = 95.1 bits (104), Expect = 4e-14
Identities = 61/67 (91%), Gaps = 0/67 (0%)
Strand=Plus/Minus
Query 74488 GTGGGATTCGAACCCACGAGTCTTACGACAGTAGAACTTGAGTCTACCCCCTTAGACCAC 74547
|||||||| |||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct 23336 GTGGGATTTGAACCCACGAGTGCGAACACAGTAGAACTTGAGTCTACCCCCTTAGACCAC 23277
Query 74548 TCGGGCA 74554
|||||||
Sbjct 23276 TCGGGCA 23270
>seq477
Length=28846
Score = 86.0 bits (94), Expect = 2e-11
Identities = 108/145 (74%), Gaps = 5/145 (3%)
Strand=Plus/Minus
Query 266272 ATACTCATTGTGAAATTCATCCAAGTACATTATTA--GGTATTTTAGCATCTTGTATTCC 266329
|||| ||||| ||||||||||| || ||| ||| ||||||| || | ||||||
Sbjct 6032 ATACGCATTGCGAAATTCATCC--GTCCATGATTCTGGGTATTTGCGCCAGTATTATTCC 5975
Query 266330 ATTTCCAGAACATAATCAAGCACCTCGTCTAACATATCAATGTGCAATGGGTAAACAGGC 266389
|| || || || ||||| |||| ||| || || || | ||| |||||||| |||||
Sbjct 5974 GTTCCCCGATCACAATCAGTCACCGCGTAACACGTACCAGTCTGCTATGGGTAAGCAGGC 5915
Query 266390 TATGGGTATCTA-TGTTACAAATTT 266413
|||||| ||||| |||| ||| |||
Sbjct 5914 TATGGGGATCTACTGTTCCAACTTT 5890
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1515019760015058
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |